RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PPP2CAP67775 309 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 NFATC4Q14934 902 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEM69Q5SWH9 247 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 PAQR9Q6ZVX9 377 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TM9SF4Q92544 642 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 SGCDQ92629 289 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 CCNL2Q96S94 520 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 EIF5A2Q9GZV4 153 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 DUSP22Q9NRW4 184 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ASB6Q9NWX5 421 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 A0A0U1RQS6 177 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 GFRA2O00451 464 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 ICMTO60725 284 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 BCKDHAP12694 445 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 CBLP22681 906 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 IVDP26440 423 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 KIR2DS3Q14952 304 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC35F1Q5T1Q4 408 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 GAREM2Q75VX8 874 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 MFSD2AQ8NA29 543 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 NAT6Q93015 286 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.39
RAPGEF1-201ENST00000372189 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 EIF1AXP47813 144 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 ATXN7L3Q14CW9 347 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 RAET1LQ5VY80 246 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 NIPAL3Q6P499 406 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 ENPP6Q6UWR7 440 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC51BQ86UW2 128 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR6C4Q8NGE1 309 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 PCDHGA7Q9Y5G6 932 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 STRCP1A6NGW2 1772 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 AK1P00568 194 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 RELAQ04206 551 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 NTRK2Q16620 822 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC36A3Q495N2 470 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 HSF5Q4G112 596 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR4N5Q8IXE1 308 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 L3HYPDHQ96EM0 354 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMEM185BQ9H7F4 350 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 ANKMY1Q9P2S6 941 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 AGAP5A6NIR3 686 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 CCNOP22674 350 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 BMXP51813 675 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 DUSP6Q16828 381 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF565Q8N9K5 539 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 FUBP1Q96AE4 644 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 BORCS7-ASMTA0A0B4J1R7 106 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 UNC119BA6NIH7 251 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 BRINP1O60477 761 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 PGCP20142 388 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 CFL1P23528 166 aaKnown RBP12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 IRS1P35568 1242 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 HK3P52790 923 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 FAM180BQ6P0A1 224 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 GDPD1Q8N9F7 314 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 PTGDR2Q9Y5Y4 395 aa12.58□□□□□ -0.4
RAPGEF1-201ENST00000372189 TAF1P21675 1872 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 A0A1B0GVI7 797 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 HYKKA2RU49 373 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 UPK1BO75841 260 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ITGA5P08648 1049 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 MRPL3P09001 348 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 GNB3P16520 340 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 AGTR1P30556 359 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 GLP1RP43220 463 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SPRED3Q2MJR0 410 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SPIN3Q5JUX0 258 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 IDO2Q6ZQW0 420 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 EID2Q8N6I1 236 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 NRG4Q8WWG1 115 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 NSMAFQ92636 917 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 RSC1A1Q92681 617 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR1F2PQ96R84 312 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 A0A1W2PPL8 197 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 F5H0A9 414 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 UQCRC1P31930 480 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SIM1P81133 766 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 ABHD17BQ5VST6 288 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 LCTLQ6UWM7 567 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 UGT2A3Q6UWM9 527 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SECISBP2Q96T21 854 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 MYNNQ9NPC7 610 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 EIF1AYO14602 144 aaKnown RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 T-ENOLP0DO92 83 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 AK4P27144 223 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 NKX2-5P52952 324 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 PGGT1BP53609 377 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 SELENOVP59797 346 aa12.57□□□□□ -0.4
RAPGEF1-201ENST00000372189 RCAN2Q14206 197 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms