RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PRRG3Q9BZD7 231 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 PIGUQ9H490 435 aa10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 TMA7Q9Y2S6 64 aaKnown RBP10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 SPIN1Q9Y657 262 aaPredicted RBP10.71□□□□□ -0.69
TSPAN1-201ENST00000372003 EP300Q09472 2414 aaPredicted RBP10.71□□□□□ -0.7
TSPAN1-201ENST00000372003 ADAMTS9Q9P2N4 1935 aa10.71□□□□□ -0.7
TSPAN1-201ENST00000372003 KNL1Q8NG31 2342 aa10.71□□□□□ -0.7
TSPAN1-201ENST00000372003 C17orf113A0A1B0GUU1 675 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 LINC00854A0A1B0GVQ3 168 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 A0A1W2PRQ8 180 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 H3BN98 237 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 PRODHO43272 600 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 CHST10O43529 356 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 KCNJ13O60928 360 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 RFPL3O75679 317 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 TP53P04637 393 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 PSKH1P11801 424 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 PDHA2P29803 388 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 KCNJ5P48544 419 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 CLCNKAP51800 687 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 SMSP52788 366 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 GAS1P54826 345 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 HOXC5Q00444 222 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 MXD1Q05195 221 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 MINDY4Q4G0A6 757 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 SYTL3Q4VX76 610 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 CRTC2Q53ET0 693 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 SYT14P1Q58G82 188 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 METRNLQ641Q3 311 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 LAMTOR1Q6IAA8 161 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 TCTN3Q6NUS6 607 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 CNIH2Q6PI25 160 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 TRILQ7L0X0 811 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 COMMD6Q7Z4G1 85 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 OR5P2Q8WZ92 322 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 C1GALT1C1Q96EU7 318 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ZBED6CLQ96FA7 236 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF764Q96H86 408 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 FOPNLQ96NB1 174 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF582Q96NG8 517 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 DCLRE1CQ96SD1 692 aaKnown RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF607Q96SK3 696 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ARHGAP9Q9BRR9 750 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF717Q9BY31 904 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 RANBP3Q9H6Z4 567 aaPredicted RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 C12orf10Q9HB07 376 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 DMRT3Q9NQL9 472 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ASB6Q9NWX5 421 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 EIF3KQ9UBQ5 218 aaKnown RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 CDV3Q9UKY7 258 aaKnown RBP10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 ING4Q9UNL4 249 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 MAP4K5Q9Y4K4 846 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 CDH10Q9Y6N8 788 aa10.7□□□□□ -0.7
TSPAN1-201ENST00000372003 OR5K3A6NET4 321 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ZSCAN5BA6NJL1 495 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 WASHC1A8K0Z3 465 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 LEUTXA8MZ59 168 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 INMT-MINDY4F8WBC2 141 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 WWP2O00308 870 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 LDOC1O95751 146 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 HLA-DPB1P04440 258 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CLEC2LP0C7M8 214 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 C1GALT1C1LP0DN25 315 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 APEX1P27695 318 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 IMPA1P29218 277 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ETV5P41161 510 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 GIPRP48546 466 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 INPP1P49441 399 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ETV1P50549 477 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ATP12AP54707 1039 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 MAZP56270 477 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 SF1Q15637 639 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 RSPO4Q2I0M5 234 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 MPEG1Q2M385 716 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ENTPD8Q5MY95 495 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ZBTB37Q5TC79 503 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 C1orf94Q6P1W5 598 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CDH24Q86UP0 819 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PDZD3Q86UT5 571 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC35F3Q8IY50 421 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 DEFB124Q8NES8 71 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 GPR156Q8NFN8 814 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 OR4M1Q8NGD0 313 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 OR52P1PQ8NH57 321 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 TMEM159Q96B96 161 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PKP4Q99569 1192 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 EMC7Q9NPA0 242 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 TEKT2Q9UIF3 430 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PCOLCE2Q9UKZ9 415 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 DYRK1BQ9Y463 629 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PI4KAP42356 2102 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC5A10A0PJK1 596 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CPED1A4D0V7 1026 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PRR19A6NJB7 356 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 OR52A4PA6NMU1 304 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PDPK1O15530 556 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 FHP07954 510 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC35G4P0C7Q5 338 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms