RNA–Protein interactions for RNA: ENST00000366892.5

PRKN-202, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-202ENST00000366892 TRAPPC6AO75865 159 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 GPIP06744 558 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 UMPSP11172 480 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 COX6B1P14854 86 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 PEX2P28328 305 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 MED21Q13503 144 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 FXNQ16595 210 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 GRAMD1BQ3KR37 738 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 VPS26BQ4G0F5 336 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 MTX3Q5HYI7 312 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 C6orf10Q5SRN2 563 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 TMEM81Q6P7N7 255 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 B3GNT6Q6ZMB0 384 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 CCDC71Q8IV32 467 aaPredicted RBP15.44■□□□□ 0.06
PRKN-202ENST00000366892 LIX1Q8N485 282 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 OR7G2Q8NG99 324 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 TMEM41AQ96HV5 264 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 EGLN2Q96KS0 407 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 METTL7AQ9H8H3 244 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 MIEF1Q9NQG6 463 aa15.44■□□□□ 0.06
PRKN-202ENST00000366892 WDR1O75083 606 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 ICOSLGO75144 302 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 HPNP05981 417 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 GLI4P10075 376 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 PRPS2P11908 318 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 SLC6A2P23975 617 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 TACR1P25103 407 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 CHRNB4P30926 498 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 PTGER4P35408 488 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 PTGDSP41222 190 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 TIGD3Q6B0B8 471 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 SLC30A6Q6NXT4 461 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 MSANTD1Q6ZTZ1 278 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 SLC15A3Q8IY34 581 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 TNIP2Q8NFZ5 429 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 TMBIM1Q969X1 311 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 UCK2Q9BZX2 261 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 C1orf109Q9NX04 203 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 MAPRE3Q9UPY8 281 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 PCDHGB3Q9Y5G1 929 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 NCKAP5O14513 1909 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 C2orf72A6NCS6 295 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 OR6C70A6NIJ9 312 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 NME4O00746 187 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 GNB5O14775 395 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 DENRO43583 198 aaKnown RBP15.43■□□□□ 0.06
PRKN-202ENST00000366892 ERN1O75460 977 aaKnown RBP15.43■□□□□ 0.06
PRKN-202ENST00000366892 REM1O75628 298 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 SMNDC1O75940 238 aaKnown RBP eCLIP15.43■□□□□ 0.061e-18■■■■■ 66.9
PRKN-202ENST00000366892 IL6P05231 212 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 HOXD4P09016 255 aaPredicted RBP15.43■□□□□ 0.06
PRKN-202ENST00000366892 ZFP36L2P47974 494 aaKnown RBP15.43■□□□□ 0.06
PRKN-202ENST00000366892 CDK9P50750 372 aaKnown RBP15.43■□□□□ 0.06
PRKN-202ENST00000366892 NCBP2P52298 156 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRKN-202ENST00000366892 SNTA1Q13424 505 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 NPSR1Q6W5P4 371 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 IKBIPQ70UQ0 350 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 PACRGLQ8N7B6 248 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 OR8J3Q8NGG0 315 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 OR10Q1Q8NGQ4 319 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 OR1J4Q8NGS1 313 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 COL21A1Q96P44 957 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 MYCBPQ99417 103 aaPredicted RBP15.43■□□□□ 0.06
PRKN-202ENST00000366892 SH3GL1Q99961 368 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 ENKD1Q9H0I2 346 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 GLIPR2Q9H4G4 154 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 FOLH1BQ9HBA9 442 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 LRTM1Q9HBL6 345 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 GALNT9Q9HCQ5 603 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 TAS2R9Q9NYW1 312 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 SNX13Q9Y5W8 968 aa15.43■□□□□ 0.06
PRKN-202ENST00000366892 A0A087WV62 115 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 A6NHS1 94 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 PLOD2O00469 737 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 GABRA1P14867 456 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 PSMA4P25789 261 aaKnown RBP15.42■□□□□ 0.06
PRKN-202ENST00000366892 ELAVL4P26378 380 aaKnown RBP15.42■□□□□ 0.06
PRKN-202ENST00000366892 PTPN6P29350 595 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 UFM1P61960 85 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 RFTN2Q52LD8 501 aaPredicted RBP15.42■□□□□ 0.06
PRKN-202ENST00000366892 C1orf185Q5T7R7 199 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 IL23RQ5VWK5 629 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 ANGPTL8Q6UXH0 198 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 FKBP9P1Q75LS8 142 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 RNF148Q8N7C7 305 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 ACBD4Q8NC06 268 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 TMCO6Q96DC7 493 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 SLC35A4Q96G79 324 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 AMDHD1Q96NU7 426 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 ADOQ96SZ5 270 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 TIMP4Q99727 224 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 SPOCK3Q9BQ16 436 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 OSBPL11Q9BXB4 747 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 KLRF1Q9NZS2 232 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 GIMAP2Q9UG22 337 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 MAGEL2Q9UJ55 1249 aa15.42■□□□□ 0.06
PRKN-202ENST00000366892 FREM3P0C091 2139 aa15.41■□□□□ 0.06
PRKN-202ENST00000366892 NKX2-6A6NCS4 301 aa15.41■□□□□ 0.06
PRKN-202ENST00000366892 ANKRD28O15084 1053 aa15.41■□□□□ 0.06
PRKN-202ENST00000366892 TSPAN2O60636 221 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms