RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 AHCYL2Q96HN2 611 aaKnown RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 TREM1Q9NP99 234 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 RCE1Q9Y256 329 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 TMEM5Q9Y2B1 443 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 INHBBP09529 407 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 EIF1AXP47813 144 aaKnown RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 SLC6A12P48065 614 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 RFPL4BQ6ZWI9 263 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 METTL27Q8N6F8 245 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 NANOGP1Q8N7R0 232 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 OR10H5Q8NGA6 315 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 SLC25A46Q96AG3 418 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 C7orf34Q96L11 122 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 CWH43Q9H720 699 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 TMEM184CQ9NVA4 438 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 KRT33AO76009 404 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 IGLV3-27P01718 113 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 PROS1P07225 676 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 PSMA3P25788 255 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 PRLHRP49683 370 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 SYT9Q86SS6 491 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 LRRC25Q8N386 305 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 ACOT11Q8WXI4 607 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 HERVK_113Q902F9 699 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 METTL2AQ96IZ6 378 aaKnown RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 CDCA4Q9BXL8 241 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 CDCP1Q9H5V8 836 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 HHATLQ9HCP6 504 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 ARPC4-TTLL3A0A0A6YYG9 625 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ADAMTS4O75173 837 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SOX18P35713 384 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 VEGFBP49765 207 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ELAVL3Q14576 367 aaKnown RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ZER1Q7Z7L7 766 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SDR16C5Q8N3Y7 309 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SPERTQ8NA61 448 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 OR6F1Q8NGZ6 308 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PITX2Q99697 317 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 KATNB1Q9BVA0 655 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PIGUQ9H490 435 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 DIMT1Q9UNQ2 313 aaKnown RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 LRRTM2O43300 516 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PIP5K1CO60331 668 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ADRB3P13945 408 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SYN1P17600 705 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 KCNJ5P48544 419 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 RAB28P51157 221 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ALG10BQ5I7T1 473 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 INO80EQ8NBZ0 244 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 CDS1Q92903 461 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 TRIM2Q9C040 744 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 C1GALT1Q9NS00 363 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 LAMP5Q9UJQ1 280 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SLC6A14Q9UN76 642 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 NEU3Q9UQ49 428 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SH2B3Q9UQQ2 575 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 EIF1AYO14602 144 aaKnown RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 FZD7O75084 574 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 FXYD6P3P58550 94 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ERVK-21P61565 698 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 POU6F2P78424 691 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PXDC1Q5TGL8 231 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ZNF615Q8N8J6 731 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 OR2A14Q96R47 310 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SAV1Q9H4B6 383 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SPATA6Q9NWH7 488 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 SLC39A1Q9NY26 324 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 TRAPPC13A5PLN9 417 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 CSF2RAP15509 400 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PTPN6P29350 595 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 TRIM23P36406 574 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 KIR2DL3P43628 341 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 PRSS45Q7RTY3 260 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 LRRC28Q86X40 367 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-201ENST00000361866 TCEAL8Q8IYN2 117 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 GIMAP1Q8WWP7 306 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 TMEM38AQ9H6F2 299 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 NPAP1Q9NZP6 1156 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 TAAR2Q9P1P5 351 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 ATPIF1Q9UII2 106 aa13.05□□□□□ -0.32
COL6A1-201ENST00000361866 GXYLT2A0PJZ3 443 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 VEGFDO43915 354 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 NAT1P18440 290 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 OR4M1Q8NGD0 313 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 HS6ST2Q96MM7 605 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 ACTR6Q9GZN1 396 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 SRRQ9GZT4 340 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 OR2S2Q9NQN1 319 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 ACSL5Q9ULC5 683 aa13.04□□□□□ -0.32
COL6A1-201ENST00000361866 CCDC88CQ9P219 2028 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms