RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RBM39Q14498 530 aaKnown RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR10K2Q6IF99 312 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR6T1Q8NGN1 323 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 SLAMF7Q9NQ25 335 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 ACPPP15309 386 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 CSKP41240 450 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 DIO3P55073 304 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 KDM8Q8N371 416 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR2M2Q96R28 347 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 MCTS1Q9ULC4 181 aaKnown RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 H7C1Q1 480 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 FOXE1O00358 373 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 MITFO75030 526 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 GMPRP36959 345 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 SEMG2Q02383 582 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR8D2Q9GZM6 311 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 ADAM12O43184 909 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 DRD2P14416 443 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 RPL13AP40429 203 aaKnown RBP12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 BRCC3P46736 316 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 CNN3Q15417 329 aaKnown RBP12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 BAGE3Q86Y29 109 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 BAGE2Q86Y30 109 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 RBPMSQ93062 196 aaKnown RBP12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 CCDC74BQ96LY2 380 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 PDZD7Q9H5P4 517 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 A0A0D9SG52 128 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 FANCGO15287 622 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 PDGFAP04085 211 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF28P17035 718 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 DLX5P56178 289 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 BCL7AQ4VC05 210 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 RFPL4BQ6ZWI9 263 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 C4orf32Q8N8J7 132 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 OR1S1Q8NH92 325 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 TSSK2Q96PF2 358 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 INTS6Q9UL03 887 aaKnown RBP12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 AHCTF1Q8WYP5 2266 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 AKAP12Q02952 1782 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 ADGRB2O60241 1585 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 A0A1W2PQ09 198 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 TTC24A2A3L6 582 aaPredicted RBP12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 BMP2P12643 396 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 DAOAP59103 153 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 EMC10Q5UCC4 262 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 CPNE8Q86YQ8 564 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 PRRT1Q99946 306 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 CLDND1Q9NY35 253 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 SCML1Q9UN30 329 aa12.52□□□□□ -0.4
SRGAP3-201ENST00000360413 PNMTP11086 282 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 IL3RAP26951 378 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 ENTHD1Q8IYW4 607 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 CDKN2AIPNLQ96HQ2 116 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 DNAJB11Q9UBS4 358 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 PCDHGA7Q9Y5G6 932 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 P2RX6O15547 441 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 SDC3O75056 442 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 PKLRP30613 574 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 GPR4P46093 362 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 AGTR2P50052 363 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 WNT4P56705 351 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 SERTAD2Q14140 314 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 OR4K15Q8NH41 348 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 OR51A7Q8NH64 312 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 RDH14Q9HBH5 336 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 CRABP1P29762 137 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 ETV5P41161 510 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 RAP2BP61225 183 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 COTL1Q14019 142 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 FAM205BPQ63HN1 556 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 OR5P2Q8WZ92 322 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 GATA6Q92908 595 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 FBXO24O75426 580 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 MRPS10P82664 201 aaKnown RBP12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 HABP2Q14520 560 aaPredicted RBP12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 C4orf17Q53FE4 359 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 GDPGP1Q6ZNW5 385 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 COX15Q7KZN9 410 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 OR4E2Q8NGC2 313 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 OR5AK2Q8NH90 309 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 SYNPRQ8TBG9 265 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 FAM46AQ96IP4 442 aaKnown RBP12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 SLC2A13Q96QE2 648 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 FEVQ99581 238 aa12.52□□□□□ -0.41
SRGAP3-201ENST00000360413 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms