RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 F2RL1P55085 397 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 RAP1BP61224 184 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 RAP1AP62834 184 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 RELAQ04206 551 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 TIGD5Q53EQ6 642 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 ZNF648Q5T619 568 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 NXPE4Q6UWF7 544 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SERPINA12Q8IW75 414 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 LOC102725191A0A1B0GVB3 256 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 PTGER4P35408 488 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 DCAF12L1Q5VU92 463 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 QRSL1Q9H0R6 528 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 MON2Q7Z3U7 1717 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 OR52E8Q6IFG1 317 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 MIB2Q96AX9 1013 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 UBL7Q96S82 380 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 CEBPZOSA8MTT3 80 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SCAMP2O15127 329 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 JMJD7P0C870 316 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 TAGLNQ01995 201 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 OR52W1Q6IF63 320 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SERINC5Q86VE9 423 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 TMEM31Q5JXX7 168 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 METTL2BQ6P1Q9 378 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 ROBO1Q9Y6N7 1651 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 XRN1Q8IZH2 1706 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 CDC123O75794 336 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 CAPNS1P04632 268 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 RAB28P51157 221 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 MGAT3Q09327 533 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 UEVLDQ8IX04 471 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SLAIN1Q8ND83 568 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 ABHD11Q8NFV4 315 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 NENFQ9UMX5 172 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 PUS1Q9Y606 427 aaKnown RBP eCLIP8.81□□□□□ -1
VPS13A-203ENST00000360280 ECI1P42126 302 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SSX7Q7RTT5 188 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 BRIX1Q8TDN6 353 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 ARPC5LQ9BPX5 153 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 PCM1Q15154 2024 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 ZNF487B1APH4 448 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 FCRL3Q96P31 734 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 CMSS1Q9BQ75 279 aaKnown RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 PDE7BQ9NP56 450 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SLC6A14Q9UN76 642 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 CES4AQ5XG92 561 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 C1orf87Q8N0U7 546 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 GCNT2Q8N0V5 402 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 DTX3Q8N9I9 347 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 PBX4Q9BYU1 374 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 ATRNL1Q5VV63 1379 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 MEGF6O75095 1541 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 A0A087WZY1 265 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 MTX2O75431 263 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 PHYHD1Q5SRE7 291 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 METAP1DQ6UB28 335 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 BPHLQ86WA6 291 aaPredicted RBP8.81□□□□□ -1
VPS13A-203ENST00000360280 KRTCAP2Q8N6L1 136 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 RNF141Q8WVD5 230 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 ST6GALNAC5Q9BVH7 336 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 NPFFR2Q9Y5X5 522 aa8.81□□□□□ -1
VPS13A-203ENST00000360280 BMP2P12643 396 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 KDELR2P33947 212 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 DBX2Q6ZNG2 339 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 DCP2Q8IU60 420 aaKnown RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 FCRL1Q96LA6 429 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 TRAF3IP2O43734 574 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 RPS17P08708 135 aaKnown RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 SOX3P41225 446 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 B3GNT7Q8NFL0 401 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ARHGAP39Q9C0H5 1083 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 MVB12BQ9H7P6 319 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 DZANK1Q9NVP4 752 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SLC22A23A1A5C7 686 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 P04436 131 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ACRV1P26436 265 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 EXOSC6Q5RKV6 272 aaKnown RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 OR10K2Q6IF99 312 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 HORMAD2Q8N7B1 307 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 MCOLN1Q9GZU1 580 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 COPS3Q9UNS2 423 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 HPGDSO60760 199 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 GLSO94925 669 aaPredicted RBP8.8□□□□□ -1
VPS13A-203ENST00000360280 CPNE6O95741 557 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 STATHP02808 62 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 LMO2P25791 158 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ELOCQ15369 112 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 DACT2Q5SW24 774 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 HEPHL1Q6MZM0 1159 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CD300LGQ6UXG3 332 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 OR4N5Q8IXE1 308 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 SLC35F2Q8IXU6 374 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ZBTB8AQ96BR9 441 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 NIPAL2Q9H841 368 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CDH20Q9HBT6 801 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 MSTNO14793 375 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 ZMAT1Q5H9K5 638 aa8.8□□□□□ -1
VPS13A-203ENST00000360280 CMASQ8NFW8 434 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms