RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 A0A1W2PPV9 198 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 DAPL1A0PJW8 107 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 LRIT2A6NDA9 550 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CPSF4LA6NMK7 179 aaKnown RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 SOCS6O14544 535 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 GPR171O14626 319 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TGM5O43548 720 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 OR1F1O43749 312 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 PRAF2O60831 178 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CH25HO95992 272 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 SERPINA3P01011 423 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 RRASP10301 218 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CSNK2A2P19784 350 aaPredicted RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 SHC1P29353 583 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TSFMP43897 325 aaKnown RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 RAB14P61106 215 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CSNK1G2P78368 415 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TMEM52BQ4KMG9 183 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 PIP5KL1Q5T9C9 394 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 LILRA6Q6PI73 481 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 AMZ2Q86W34 360 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 RAB42Q8N4Z0 105 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 ZNF366Q8N895 744 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TMIEQ8NEW7 156 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 BBS1Q8NFJ9 593 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 OR51G2Q8NGK0 314 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TRMT10AQ8TBZ6 339 aaKnown RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CYB5D2Q8WUJ1 264 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 HSD17B8Q92506 261 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 NDC1Q9BTX1 674 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 LYARQ9NX58 379 aaKnown RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 PLAGL1Q9UM63 463 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 FEZF1A0PJY2 475 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 SLC22A31A6NKX4 558 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 DUXAA6NLW8 204 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 H7BY64 318 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 BMP8BP34820 402 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TRHRP34981 398 aaPredicted RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CA8P35219 290 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 PRKAG1P54619 331 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 RGS8P57771 180 aaPredicted RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 AANATQ16613 207 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 HEPHL1Q6MZM0 1159 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 LYPD4Q6UWN0 246 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 NKAIN4Q8IVV8 208 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 NRMQ8IXM6 262 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TIGD4Q8IY51 512 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 PXYLP1Q8TE99 480 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 COX14Q96I36 57 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 PRAP1Q96NZ9 151 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 MCHR1Q99705 422 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 C1QTNF7Q9BXJ2 289 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 DLL4Q9NR61 685 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 KIF25Q9UIL4 384 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CCL26Q9Y258 94 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 GPR55Q9Y2T6 319 aaPredicted RBP10.65□□□□□ -0.7
CAPN9-202ENST00000354537 CHST2Q9Y4C5 530 aa10.65□□□□□ -0.7
CAPN9-202ENST00000354537 TRAV6A0A075B6T7 132 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 UNC119BA6NIH7 251 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 LRRN3E7EW58 273 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 K7ESM1 405 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 MEN1O00255 615 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 ZNF749O43361 778 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 STX11O75558 287 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 CD1AP06126 327 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 GJA1P17302 382 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 DNASE1P24855 282 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 MPIP34949 423 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 GCGRP47871 477 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 CLCNKAP51800 687 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 EPHA5P54756 1037 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 NRG3P56975 720 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 CAP1Q01518 475 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 TLE2Q04725 743 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 LY6G5CQ5SRR4 150 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 FAM69AQ5T7M9 428 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 METRNLQ641Q3 311 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 ADAMTSL4Q6UY14 1074 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 KRT74Q7RTS7 529 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 OLIG3Q7RTU3 272 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 CEACAM19Q7Z692 300 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 COMMD7Q86VX2 200 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 MEX3DQ86XN8 651 aaKnown RBP10.64□□□□□ -0.71
CAPN9-202ENST00000354537 VRK2Q86Y07 508 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 SIAH3Q8IW03 269 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 LNX2Q8N448 690 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 HDDC3Q8N4P3 179 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 AMER3Q8N944 861 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 AUTS2Q8WXX7 1259 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 LCORQ96JN0 433 aaPredicted RBP10.64□□□□□ -0.71
CAPN9-202ENST00000354537 SAMD8Q96LT4 415 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 LRRN3Q9H3W5 708 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 MTHFD2LQ9H903 347 aaPredicted RBP10.64□□□□□ -0.71
CAPN9-202ENST00000354537 CES1P1Q9UKY3 287 aa10.64□□□□□ -0.71
CAPN9-202ENST00000354537 PRELID1Q9Y255 219 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms