RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 RNF212Q495C1 297 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 RPS26P11Q5JNZ5 115 aaPredicted RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 KIAA1161Q6NSJ0 714 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 SMARCD3Q6STE5 483 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 APOOLQ6UXV4 268 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 SLC36A4Q6YBV0 504 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 GPC2Q8N158 579 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ARMC10Q8N2F6 343 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 SLC44A3Q8N4M1 653 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 UBTD2Q8WUN7 234 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 THEM6Q8WUY1 208 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 FATE1Q969F0 183 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 TOX2Q96NM4 488 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 GPA33Q99795 319 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 PLA2G12AQ9BZM1 189 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 MROH8Q9H579 483 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ASH2LQ9UBL3 628 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 RLFQ13129 1914 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 A0A1W2PPE3 182 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 IRGMA1A4Y4 181 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 E9PI62 339 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 RAMP2O60895 175 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 MUC1P15941 1255 aaPredicted RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 RIDAP52758 137 aaKnown RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 ZNF626Q68DY1 528 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 FAM122BQ7Z309 247 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 OR52N2Q8NGI0 321 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 HAVCR2Q8TDQ0 301 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 STK35Q8TDR2 534 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 SORCS1Q8WY21 1168 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 IGSF8Q969P0 613 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 GAL3ST1Q99999 423 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 WFDC6Q9BQY6 131 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 PIGMQ9H3S5 423 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 ARL15Q9NXU5 204 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 KLF15Q9UIH9 416 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 PCDHB10Q9UN67 800 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 PCDHGA5Q9Y5G8 931 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 PRSS21Q9Y6M0 314 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 A0A0G2JK05 382 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 C2orf74A8MZ97 194 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 CHST10O43529 356 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 VEGFDO43915 354 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 RAD1O60671 282 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 C6orf47O95873 294 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 DGKAP23743 735 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 MMP11P24347 488 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 CD96P40200 585 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 RING1Q06587 406 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 ACSM2AQ08AH3 577 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 CCINQ13939 588 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 ZNF385BQ569K4 471 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 FKBP1CQ5VVH2 108 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 ACSM2BQ68CK6 577 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 FBXO16Q8IX29 292 aaPredicted RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 FAM98AQ8NCA5 519 aaKnown RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 RSPO3Q9BXY4 272 aaPredicted RBP12.4□□□□□ -0.42
IFT88-202ENST00000351808 EGLN3Q9H6Z9 239 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 TMEM248Q9NWD8 314 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 PCDHGC4Q9Y5F7 938 aa12.4□□□□□ -0.42
IFT88-202ENST00000351808 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 ANXA5P08758 320 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 PPT1P50897 306 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 CDH11P55287 796 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 PCBP3P57721 371 aaKnown RBP12.4□□□□□ -0.43
IFT88-202ENST00000351808 SORDQ00796 357 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 SERINC3Q13530 473 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 FAM69AQ5T7M9 428 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 ANXA8L1Q5VT79 327 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 DCAF12L2Q5VW00 463 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 HEPHL1Q6MZM0 1159 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 SSX9Q7RTT3 188 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 TPRA1Q86W33 373 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 MTMR14Q8NCE2 650 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 TRIM43Q96BQ3 446 aaPredicted RBP12.4□□□□□ -0.43
IFT88-202ENST00000351808 ZNF649Q9BS31 505 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 UCK1Q9HA47 277 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 TAS2R5Q9NYW4 299 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 ZNF629Q9UEG4 869 aaPredicted RBP12.4□□□□□ -0.43
IFT88-202ENST00000351808 PCDHB9Q9Y5E1 797 aa12.4□□□□□ -0.43
IFT88-202ENST00000351808 ARGFXA6NJG6 315 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 DLX5P56178 289 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 GMFBP60983 142 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 SHC2P98077 582 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 CDK5Q00535 292 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 PIN1Q13526 163 aaPredicted RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 LINC00303Q3SY05 128 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 SMIM4Q8WVI0 70 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 MRPL38Q96DV4 380 aaKnown RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 TCEAL7Q9BRU2 100 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 WRAP53Q9BUR4 548 aaKnown RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 SMG9Q9H0W8 520 aaKnown RBP12.39□□□□□ -0.43
IFT88-202ENST00000351808 WDR13Q9H1Z4 485 aa12.39□□□□□ -0.43
IFT88-202ENST00000351808 SLC38A1Q9H2H9 487 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms