RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 LIMS1P48059 325 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KCNJ5P48544 419 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 CDH11P55287 796 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 SKP1P63208 163 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 BTG2P78543 158 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 TDGQ13569 410 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 ELOCQ15369 112 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KCNJ8Q15842 424 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 DUSP5Q16690 384 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 NDUFA9Q16795 377 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 SLC48A1Q6P1K1 146 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 NRARPQ7Z6K4 114 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 NKAIN4Q8IVV8 208 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KBTBD8Q8NFY9 601 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 OR52R1Q8NGF1 315 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 RIT1Q92963 219 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 GAL3ST3Q96A11 431 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 ZNF354BQ96LW1 612 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 TRNT1Q96Q11 434 aaKnown RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 MMP28Q9H239 520 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 FAM60AQ9NP50 221 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 FSCN3Q9NQT6 498 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 FBXO34Q9NWN3 711 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KIF26AQ9ULI4 1882 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 MAN2B1O00754 1011 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 CASKO14936 926 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PIP5K1CO60331 668 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 IMPDH2P12268 514 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 CELP19835 753 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 FUT5Q11128 374 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KIR2DS3Q14952 304 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 TOMM20Q15388 145 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 SMAD2Q15796 467 aaKnown RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 BAK1Q16611 211 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PHF19Q5T6S3 580 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 FBXO42Q6P3S6 717 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PRICKLE2Q7Z3G6 844 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 GLCCI1Q86VQ1 547 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 BBS10Q8TAM1 723 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KLHL6Q8WZ60 621 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 SAMD8Q96LT4 415 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 GAL3ST1Q99999 423 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 SPATA9Q9BWV2 254 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 HDHD5Q9BXW7 423 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 ACTRT3Q9BYD9 372 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PCDHGA3Q9Y5H0 932 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 AP1M2Q9Y6Q5 423 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 AHRP35869 848 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PCBP4P57723 403 aaKnown RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 POU6F2P78424 691 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 HNRNPA0Q13151 305 aaKnown RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 COL13A1Q5TAT6 717 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 ARHGAP40Q5TG30 622 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KIAA0895LQ68EN5 471 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 NCCRP1Q6ZVX7 275 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 BBS1Q8NFJ9 593 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 FCGR1BQ92637 280 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 WDR34Q96EX3 536 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 MENTQ9BUN1 341 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 UBE2ZQ9H832 354 aaPredicted RBP9.7□□□□□ -0.86
SMPD4-201ENST00000351288 PRDM7Q9NQW5 492 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 CALML5Q9NZT1 146 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 SSR3Q9UNL2 185 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 KIAA1549LQ6ZVL6 1849 aa9.7□□□□□ -0.86
SMPD4-201ENST00000351288 GXYLT2A0PJZ3 443 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 TMEM150CB9EJG8 249 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 UBXN7O94888 489 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 APOA1P02647 267 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 OPN1LWP04000 364 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 FCER2P06734 321 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 TRHRP34981 398 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 CSTF1Q05048 431 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 BIKQ13323 160 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 TRAM2Q15035 370 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 ENTPD8Q5MY95 495 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 MFSD9Q8NBP5 474 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 RCBTB1Q8NDN9 531 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 CREB3L4Q8TEY5 395 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 DCLRE1CQ96SD1 692 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 DDX31Q9H8H2 851 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 KRCC1Q9NPI7 259 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 LYARQ9NX58 379 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 LRIT1Q9P2V4 623 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 SCML1Q9UN30 329 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 TRAV27A0A087WT01 109 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 A0A087WUU8 490 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 A0A0J9YY10 115 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 C2orf92A0A1B0GVN3 265 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 A0A1B0GVT2 93 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 NDUFB5O43674 189 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 HCN1O60741 890 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 NAA10P41227 235 aaPredicted RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 HNRNPFP52597 415 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 RPS25P62851 125 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 CSNK2BP67870 215 aa9.69□□□□□ -0.86
SMPD4-201ENST00000351288 CRYZQ08257 329 aaKnown RBP9.69□□□□□ -0.86
SMPD4-201ENST00000351288 SF3B4Q15427 424 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■■■ 54.2
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms