RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 IFI30P13284 250 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 GIPRP48546 466 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ARL4DP49703 201 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF91Q05481 1191 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF655Q8N720 491 aaPredicted RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 ASCC1Q8N9N2 400 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 CYB561A3Q8NBI2 242 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 AHCYL2Q96HN2 611 aaKnown RBP12.95□□□□□ -0.34
TRIM4-201ENST00000349062 REV1Q9UBZ9 1251 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 HSPE1-MOB4S4R3N1 261 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 PCDH15Q96QU1 1955 aa12.95□□□□□ -0.34
TRIM4-201ENST00000349062 A0A0G2JPF8 293 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 A0A0J9YY10 115 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 HNRNPCL2B2RXH8 293 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 HNRNPCL3B7ZW38 293 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 MRPL3P09001 348 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 HNRNPCL4P0DMR1 293 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SLC15A1P46059 708 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 TBRG1Q3YBR2 411 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 MRPL2Q5T653 305 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 COL13A1Q5TAT6 717 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 TRIM69Q86WT6 500 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 MCATQ8IVS2 390 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SLC30A8Q8IWU4 369 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 PFN4Q8NHR9 129 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SAMD8Q96LT4 415 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SAP130Q9H0E3 1048 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SP140LQ9H930 580 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 MOV10Q9HCE1 1003 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 MAN2C1Q9NTJ4 1040 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 UCKL1Q9NWZ5 548 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 DHCR7Q9UBM7 475 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SAGE2PA6NJ88 616 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 TSC22D2O75157 780 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 GYPBP06028 91 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 CXCR4P61073 352 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 GNA13Q14344 377 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 C1orf189Q5VU69 101 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF770Q6IQ21 691 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 DENND6BQ8NEG7 585 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 BBS1Q8NFJ9 593 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 OR4F15Q8NGB8 312 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 BAHD1Q8TBE0 780 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SLC41A3Q96GZ6 507 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 MS4A4EQ96PG1 132 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 PITHD1Q9GZP4 211 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 RPRD1BQ9NQG5 326 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 PNO1Q9NRX1 252 aaKnown RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SPIN1Q9Y657 262 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 METTL15A6NJ78 407 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 KIAA0513O60268 411 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SOX6P35712 828 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 FRKP42685 505 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SMIM11AP58511 58 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF181Q2M3W8 571 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF836Q6ZNA1 936 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 PRR22Q8IZ63 422 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 NATD1Q8N6N6 113 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 C1GALT1C1Q96EU7 318 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 SPACA7Q96KW9 195 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 C10orf90Q96M02 699 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 CDADC1Q9BWV3 514 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 FSCN3Q9NQT6 498 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 WSB2Q9NYS7 404 aaPredicted RBP12.94□□□□□ -0.34
TRIM4-201ENST00000349062 OSGIN1Q9UJX0 560 aa12.94□□□□□ -0.34
TRIM4-201ENST00000349062 A6NCN8 305 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 EFCAB10A6NFE3 127 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 LRRN3E7EW58 273 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 KCNJ13O60928 360 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 UBXN7O94888 489 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 RGS6P49758 472 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 CAV3P56539 151 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 DCST2Q5T1A1 773 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 PDZK1Q5T2W1 519 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 FRRS1Q6ZNA5 592 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 TTLL10Q6ZVT0 673 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 KIF18BQ86Y91 864 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 CYP4Z2PQ8N1L4 340 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 DTX3Q8N9I9 347 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 OR8D4Q8NGM9 314 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 PIGXQ8TBF5 258 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 APOBEC4Q8WW27 367 aaKnown RBP12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF566Q969W8 418 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 PRRC1Q96M27 445 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 GAL3ST4Q96RP7 486 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 SDF2Q99470 211 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 LRRN3Q9H3W5 708 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 TBC1D17Q9HA65 648 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ZNF443Q9Y2A4 671 aaPredicted RBP12.93□□□□□ -0.34
TRIM4-201ENST00000349062 SLC22A7Q9Y694 548 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 TRAV27A0A087WT01 109 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 ARHGAP33O14559 1287 aa12.93□□□□□ -0.34
TRIM4-201ENST00000349062 CPNE3O75131 537 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms