RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZNF527Q8NB42 609 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 POGLUT1Q8NBL1 392 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 S100A14Q9HCY8 104 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 ARMC1Q9NVT9 282 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 AURKCQ9UQB9 309 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 CPAMD8Q8IZJ3 1885 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 CDHR4A6H8M9 788 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 PRAMEF25A6NGN4 478 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ADAM10O14672 748 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 FKBP6O75344 327 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 KRT36O76013 467 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 RAP2AP10114 183 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 CHRNB3Q05901 458 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 IFI44LQ53G44 452 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF468Q5VIY5 522 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-202ENST00000348495 IRAK1BP1Q5VVH5 260 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 APLFQ8IW19 511 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-202ENST00000348495 BEST3Q8N1M1 668 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 TMEM156Q8N614 296 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 OR10G3Q8NGC4 313 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 OR5M3Q8NGP4 307 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 PROX1Q92786 737 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 STMN2Q93045 179 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 TMCO6Q96DC7 493 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 NODALQ96S42 347 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 RLIMQ9NVW2 624 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 STMN3Q9NZ72 180 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ABCG2Q9UNQ0 655 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 KCNMB2Q9Y691 235 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 SERINC4A6NH21 518 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 C1QTNF9BB2RNN3 333 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ALG1L2C9J202 215 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 C1QTNF9P0C862 333 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 HOXB6P17509 224 aaKnown RBP24.83■■□□□ 1.57
SSBP4-202ENST00000348495 TNFRSF1BP20333 461 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 EVI2BP34910 448 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ADH7P40394 386 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 MRPL2Q5T653 305 aaKnown RBP24.83■■□□□ 1.57
SSBP4-202ENST00000348495 CMIPQ8IY22 773 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 GEMIN6Q8WXD5 167 aaKnown RBP24.83■■□□□ 1.57
SSBP4-202ENST00000348495 C7orf34Q96L11 122 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 DCBLD2Q96PD2 775 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ARHGDIGQ99819 225 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 WFDC6Q9BQY6 131 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 SH2D2AQ9NP31 389 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.83■■□□□ 1.57
SSBP4-202ENST00000348495 RAXQ9Y2V3 346 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 SH3GLB1Q9Y371 365 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 AP4S1Q9Y587 144 aa24.83■■□□□ 1.57
SSBP4-202ENST00000348495 URB1O60287 2271 aaKnown RBP24.83■■□□□ 1.56
SSBP4-202ENST00000348495 A0A1W2PQD3 144 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 SCDO00767 359 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 BCAS1O75363 584 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-202ENST00000348495 MAGEA2P43356 314 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 ST13P50502 369 aaKnown RBP24.82■■□□□ 1.56
SSBP4-202ENST00000348495 RNF144AP50876 292 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-202ENST00000348495 NRF1Q16656 503 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 IQCCQ4KMZ1 466 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 EIPR1Q53HC9 387 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 ABHD17BQ5VST6 288 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 IL20RBQ6UXL0 311 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 ZNF614Q8N883 585 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 GRHL3Q8TE85 626 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 RTN4RQ9BZR6 473 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 IL1RAPQ9NPH3 570 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 CHCHD2Q9Y6H1 151 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-202ENST00000348495 IGF2RP11717 2491 aa24.82■■□□□ 1.56
SSBP4-202ENST00000348495 HPGDP15428 266 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 OR1E2P47887 323 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 RIPK1Q13546 671 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 ZSWIM7Q19AV6 140 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 TBCELQ5QJ74 424 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 TSEN54Q7Z6J9 526 aaKnown RBP24.81■■□□□ 1.56
SSBP4-202ENST00000348495 GRAMD2AQ8IUY3 354 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 OR4D11Q8NGI4 311 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 CHID1Q9BWS9 393 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 GPR83Q9NYM4 423 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 A6NL46 340 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 CEACAM4O75871 244 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 HLCSP50747 726 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 VLDLRP98155 873 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 KCNC4Q03721 635 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 CD226Q15762 336 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 UNQ6494/PRO21346Q6UXR6 183 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 ERMP1Q7Z2K6 904 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 GPALPP1Q8IXQ4 340 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 FAM71CQ8NEG0 241 aa24.81■■□□□ 1.56
SSBP4-202ENST00000348495 SECISBP2Q96T21 854 aaKnown RBP24.81■■□□□ 1.56
SSBP4-202ENST00000348495 CDK2AP1O14519 115 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 TP53I11O14683 189 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 AGAP7PQ5VUJ5 663 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 TMEM81Q6P7N7 255 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 PIWIL3Q7Z3Z3 882 aaKnown RBP24.8■■□□□ 1.56
SSBP4-202ENST00000348495 CARM1Q86X55 608 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 LACC1Q8IV20 430 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 SGCZQ96LD1 299 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 AGAP4Q96P64 663 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 ARMC7Q9H6L4 198 aa24.8■■□□□ 1.56
SSBP4-202ENST00000348495 ZNF552Q9H707 407 aaPredicted RBP24.8■■□□□ 1.56
SSBP4-202ENST00000348495 HPF1Q9NWY4 346 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms