RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 BCKDKO14874 412 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 TO15178 435 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 OR10H3O60404 316 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 FMO6PO60774 539 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 MT-CO3P00414 261 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 ADAP00813 363 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 CD63P08962 238 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 KRT20P35900 424 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 FOXD4Q12950 439 aaPredicted RBP17.24■□□□□ 0.35
PTN-201ENST00000348225 EIF3IQ13347 325 aaKnown RBP17.24■□□□□ 0.35
PTN-201ENST00000348225 BLMHQ13867 455 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 KEAP1Q14145 624 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 FGFBP1Q14512 234 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 ZNF770Q6IQ21 691 aaPredicted RBP17.24■□□□□ 0.35
PTN-201ENST00000348225 PAPD4Q6PIY7 484 aaKnown RBP17.24■□□□□ 0.35
PTN-201ENST00000348225 FAM198BQ6UWH4 519 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 CPEB2Q7Z5Q1 589 aaKnown RBP17.24■□□□□ 0.35
PTN-201ENST00000348225 ZNF527Q8NB42 609 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 TOR1AIP2Q8NFQ8 470 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 SLC7A13Q8TCU3 470 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 DIO2Q92813 273 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 SLC35B4Q969S0 331 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 MUS81Q96NY9 551 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 TAAR9Q96RI9 348 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 FUZQ9BT04 418 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 SEMA4CQ9C0C4 833 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 GRIP2Q9C0E4 1043 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 ZNF696Q9H7X3 374 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 BATF3Q9NR55 127 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 CTPS2Q9NRF8 586 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 MAN2C1Q9NTJ4 1040 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 PPIEQ9UNP9 301 aaKnown RBP17.24■□□□□ 0.35
PTN-201ENST00000348225 B3GALT1Q9Y5Z6 326 aa17.24■□□□□ 0.35
PTN-201ENST00000348225 CCDC187A0A096LP49 1063 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 IGHV3-20A0A0C4DH32 117 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 TPST2O60704 377 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 CYP7B1O75881 506 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 FUT4P22083 530 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 ETV5P41161 510 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 GPR143P51810 404 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 ZNF136P52737 540 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 UGT2B15P54855 530 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 NPRL3Q12980 569 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 NCF4Q15080 339 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 PODNL1Q6PEZ8 512 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 TTC33Q6PID6 262 aaPredicted RBP17.23■□□□□ 0.35
PTN-201ENST00000348225 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
PTN-201ENST00000348225 THAP5Q7Z6K1 395 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 PIP4P1Q86T03 277 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 TSPYL5Q86VY4 417 aaPredicted RBP17.23■□□□□ 0.35
PTN-201ENST00000348225 PARP8Q8N3A8 854 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 GALNT6Q8NCL4 622 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 SETD9Q8NE22 299 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 ADAMTS16Q8TE57 1224 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 EFHD2Q96C19 240 aaPredicted RBP17.23■□□□□ 0.35
PTN-201ENST00000348225 HSPBAP1Q96EW2 488 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 VMP1Q96GC9 406 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 NIPSNAP1Q9BPW8 284 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 LRFN3Q9BTN0 628 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 ING2Q9H160 280 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 AKIRIN1Q9H9L7 192 aaPredicted RBP17.23■□□□□ 0.35
PTN-201ENST00000348225 PISDQ9UG56 409 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 MYRFQ9Y2G1 1151 aa17.23■□□□□ 0.35
PTN-201ENST00000348225 DLL1O00548 723 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 STK17BO94768 372 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 CYP4B1P13584 511 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 IFNGR2P38484 337 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 NR0B1P51843 470 aaKnown RBP17.22■□□□□ 0.35
PTN-201ENST00000348225 HOXC5Q00444 222 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 SEC23BQ15437 767 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 TRIP6Q15654 476 aaKnown RBP17.22■□□□□ 0.35
PTN-201ENST00000348225 ZNF691Q5VV52 312 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 FAM199XQ6PEV8 388 aaPredicted RBP17.22■□□□□ 0.35
PTN-201ENST00000348225 HSDL2Q6YN16 418 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 NFAM1Q8NET5 270 aaPredicted RBP17.22■□□□□ 0.35
PTN-201ENST00000348225 SLC41A3Q96GZ6 507 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 APOL4Q9BPW4 351 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 UBQLN4Q9NRR5 601 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 TOR4AQ9NXH8 423 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 KIF26BQ2KJY2 2108 aa17.22■□□□□ 0.35
PTN-201ENST00000348225 SERINC4A6NH21 518 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 SEC24DO94855 1032 aaPredicted RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 GASTP01350 101 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 HPGDP15428 266 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 IL12BP29460 328 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 HOXD11P31277 338 aaPredicted RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 POLR2IP36954 125 aaKnown RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 RNF4P78317 190 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 PLCXD2Q0VAA5 305 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 STPG1Q5TH74 334 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 ZNF550Q7Z398 422 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 SLC34A3Q8N130 599 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 ZNF786Q8N393 782 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 ZNF441Q8N8Z8 693 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 GTPBP3Q969Y2 492 aaKnown RBP17.21■□□□□ 0.35
PTN-201ENST00000348225 TP53INP1Q96A56 240 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 LMF1Q96S06 567 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 ZNF559Q9BR84 538 aa17.21■□□□□ 0.35
PTN-201ENST00000348225 PRR14Q9BWN1 585 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms