RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 FIGNL1Q6PIW4 674 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 HSDL2Q6YN16 418 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 DGAT2L6Q6ZPD8 337 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 ZAR1Q86SH2 424 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 CELF2-AS1Q8N7Q2 184 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 FLCNQ8NFG4 579 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 PFN4Q8NHR9 129 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 ZFPM2Q8WW38 1151 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 C1GALT1C1Q96EU7 318 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MIXL1Q9H2W2 232 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 ATP13A2Q9NQ11 1180 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 HINT3Q9NQE9 182 aaKnown RBP14.36□□□□□ -0.11
UPF3B-202ENST00000345865 HRASLS2Q9NWW9 162 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 MAT2BQ9NZL9 334 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 CBLCQ9ULV8 474 aa14.36□□□□□ -0.11
UPF3B-202ENST00000345865 IQCMA0A1B0GVH7 501 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 SNTNA6NMZ2 147 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 SOCS6O14544 535 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 IL1AP01583 271 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 THBS1P07996 1170 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 MAKP20794 623 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 NT5EP21589 574 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 DRD1P21728 446 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 LTBRP36941 435 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 TPTEP56180 551 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 YPEL5P62699 121 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 UBE2IP63279 158 aaKnown RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 SRSF5Q13243 272 aaKnown RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF619Q8N2I2 560 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 GPBAR1Q8TDU6 330 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 SLC37A2Q8TED4 501 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 RERGQ96A58 199 aaPredicted RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 CCDC32Q9BV29 185 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 DPH1Q9BZG8 443 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 UBQLN3Q9H347 655 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 NLGN3Q9NZ94 848 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF223Q9UK11 482 aaPredicted RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 EXOSC1Q9Y3B2 195 aaKnown RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 CDH10Q9Y6N8 788 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 GXYLT2A0PJZ3 443 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 SLC35F4A4IF30 521 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 SNPHO15079 494 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 PLOD3O60568 738 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 GPR75O95800 540 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 AKT2P31751 481 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 MAP3K8P41279 467 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 CAV3P56539 151 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 INSL4Q14641 139 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 CRTC2Q53ET0 693 aaPredicted RBP14.35□□□□□ -0.11
UPF3B-202ENST00000345865 TMPRSS11AQ6ZMR5 421 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 QSOX2Q6ZRP7 698 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 RNF44Q7L0R7 432 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 OR8H2Q8N162 312 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 CA13Q8N1Q1 262 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 WDFY2Q96P53 400 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 KATNB1Q9BVA0 655 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 FAM60AQ9NP50 221 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 ABCB9Q9NP78 766 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
UPF3B-202ENST00000345865 MN1Q10571 1320 aaPredicted RBP14.34□□□□□ -0.11
UPF3B-202ENST00000345865 CDHR4A6H8M9 788 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 SHISA7A6NL88 538 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 C2orf74A8MZ97 194 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 C10orf142B7Z368 130 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 SGK494L7N484 410 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 GALR3O60755 368 aaPredicted RBP14.34□□□□□ -0.11
UPF3B-202ENST00000345865 STX11O75558 287 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 IGHV4-34P06331 123 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 NID1P14543 1247 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 AZGP1P25311 298 aaKnown RBP14.34□□□□□ -0.11
UPF3B-202ENST00000345865 GCGRP47871 477 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 OR1Q1Q15612 314 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 CPOQ8IVL8 374 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 OR2T33Q8NG76 320 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 UFD1Q92890 307 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 ANKRD9Q96BM1 317 aaPredicted RBP14.34□□□□□ -0.11
UPF3B-202ENST00000345865 MSLNLQ96KJ4 702 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 PRRG3Q9BZD7 231 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 ISYNA1Q9NPH2 558 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 PRDM9Q9NQV7 894 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 DUSP22Q9NRW4 184 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 CD207Q9UJ71 328 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 EXOGQ9Y2C4 368 aaKnown RBP14.34□□□□□ -0.11
UPF3B-202ENST00000345865 CMAHPQ9Y471 501 aa14.34□□□□□ -0.11
UPF3B-202ENST00000345865 A0A087WV62 115 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 IRGMA1A4Y4 181 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 ZC3H12DA2A288 527 aaKnown RBP14.33□□□□□ -0.11
UPF3B-202ENST00000345865 TRAPPC13A5PLN9 417 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 SEMA4FO95754 770 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF10P21506 573 aaPredicted RBP14.33□□□□□ -0.11
UPF3B-202ENST00000345865 VSX2P58304 361 aaPredicted RBP14.33□□□□□ -0.11
UPF3B-202ENST00000345865 RUNX1T1Q06455 604 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 ZNF791Q3KP31 576 aaPredicted RBP14.33□□□□□ -0.11
UPF3B-202ENST00000345865 NXNL2Q5VZ03 156 aa14.33□□□□□ -0.11
UPF3B-202ENST00000345865 ZC3H14Q6PJT7 736 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms