RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ASCC3Q8N3C0 2202 aaKnown RBP8.58□□□□□ -1.04
ATG4A-202ENST00000345734 CFAP54Q96N23 3096 aa8.58□□□□□ -1.04
ATG4A-202ENST00000345734 A0A087WV62 115 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CENPVL1A0A0U1RR11 272 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CLDN24A6NM45 220 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 HRKO00198 91 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 TBX1O43435 398 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 NUDT21O43809 227 aaKnown RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 PCDHGA12O60330 932 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 OR10H2O60403 315 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 NSA2O95478 260 aaKnown RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CBX7O95931 251 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 SLC35E2P0CK97 266 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 TDGF1P13385 188 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 RNH1P13489 461 aaKnown RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 BTG2P78543 158 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 HOXC5Q00444 222 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 SLC13A2Q13183 592 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 FAM53BQ14153 422 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ARHGAP11BQ3KRB8 267 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 DCST1Q5T197 706 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 BROXQ5VW32 411 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 SLC6A19Q695T7 634 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 BORAQ6PGQ7 559 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 KLHL17Q6TDP4 642 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GPR141Q7Z602 305 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GATAD2AQ86YP4 633 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ENTHD1Q8IYW4 607 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CLIP4Q8N3C7 705 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 OR52P1PQ8NH57 321 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 SLC7A13Q8TCU3 470 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF675Q8TD23 568 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 APH1BQ8WW43 257 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CTHRC1Q96CG8 243 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 MMABQ96EY8 250 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 MED30Q96HR3 178 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CCDC74BQ96LY2 380 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 SDF2Q99470 211 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ELF4Q99607 663 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 RHNO1Q9BSD3 238 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 FUZQ9BT04 418 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 RAB33BQ9H082 229 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ZNF556Q9HAH1 456 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 MAN2C1Q9NTJ4 1040 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CALML5Q9NZT1 146 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CRNNQ9UBG3 495 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 TMCC3Q9ULS5 477 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 RNF6Q9Y252 685 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 MAU2Q9Y6X3 613 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 HSPE1-MOB4S4R3N1 261 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GXYLT2A0PJZ3 443 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 A8MU76 341 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 OR10H3O60404 316 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 WBP4O75554 376 aaKnown RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 UGT2B17O75795 530 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 NTN1O95631 604 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 IGFBP1P08833 259 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ALOX5P09917 674 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GLB1P16278 677 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GGT2P36268 569 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 AVPR1BP47901 424 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GABARAPL2P60520 117 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 TOP3AQ13472 1001 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 RAB39AQ14964 217 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 NR1D2Q14995 579 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 GPR68Q15743 365 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ANKDD1AQ495B1 522 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ZBED5Q49AG3 693 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 PRAMEF17Q5VTA0 474 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 TMEM236Q5W0B7 351 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 PMS2CLQ68D20 193 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 XAF1Q6GPH4 301 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 PODNL1Q6PEZ8 512 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ZC3H14Q6PJT7 736 aaKnown RBP8.57□□□□□ -1.04
ATG4A-202ENST00000345734 LINC00114Q6XXX2 140 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 WDFY3Q8IZQ1 3526 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 TMCO5AQ8N6Q1 288 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 OR52R1Q8NGF1 315 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 ARHGDIGQ99819 225 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 FNDC11Q9BVV2 318 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 PIGUQ9H490 435 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 FANCEQ9HB96 536 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 NTNG1Q9Y2I2 539 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 WDR45Q9Y484 360 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CLDN16Q9Y5I7 305 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 CSNK1G3Q9Y6M4 447 aa8.57□□□□□ -1.04
ATG4A-202ENST00000345734 NPIPA5A0A0B4J1W7 369 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 FITM1A5D6W6 292 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 ARRDC5A6NEK1 342 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 TMEM150CB9EJG8 249 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 NPIPA7E9PJI5 369 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 M0R129 80 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 SYT5O00445 386 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 FAAHO00519 579 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 DUX1O43812 170 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 HYAL3O43820 417 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-202ENST00000345734 CTNSO60931 367 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 TIAF1O95411 115 aa8.56□□□□□ -1.04
ATG4A-202ENST00000345734 AGR2O95994 175 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms