RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MKRN2OSH3BPM6 223 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RAB10P61026 200 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ACTR1AP61163 376 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TNFAIP8L2Q6P589 184 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 AMNQ9BXJ7 453 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF768Q9H5H4 540 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FZD10Q9ULW2 581 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MRPS28Q9Y2Q9 187 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 HIBADHP31937 336 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CSNK1G2P78368 415 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ECM1Q16610 540 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 LIPJQ5W064 366 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MFSD7Q6UXD7 560 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MON1BQ7L1V2 547 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 AGBL3Q8NEM8 1001 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OR56A3Q8NH54 315 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CYP2W1Q8TAV3 490 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TSPAN10Q9H1Z9 355 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ITM2CQ9NQX7 267 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 COA4Q9NYJ1 87 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 HAO2Q9NYQ3 351 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OR5AC2Q9NZP5 309 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FBXL21Q9UKT6 434 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 XKRY2A2RUG3 117 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 C7orf66A4D0T2 115 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ELK4P28324 431 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TAS2R46P59540 309 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 COMMD6Q7Z4G1 85 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 APOBEC3FQ8IUX4 373 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PROKR2Q8NFJ6 384 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 STXBP6Q8NFX7 210 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ARL2P36404 184 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RFX2P48378 723 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CD300CQ08708 224 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 LMAN2Q12907 356 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF620Q6ZNG0 422 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CIB3Q96Q77 187 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SEMA6CQ9H3T2 930 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM100Q9NV29 134 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF490Q9ULM2 529 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 KCNK6Q9Y257 313 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SPTAN1Q13813 2472 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PMS2P1A4D2B8 440 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SERPINE3A8MV23 424 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 IL33O95760 270 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 P2RY4P51582 365 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SRSF5Q13243 272 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ILKQ13418 452 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM179Q6ZVK1 233 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 LGI4Q8N135 537 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM102Q8N9M5 508 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CPT1CQ8TCG5 803 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 KATNB1Q9BVA0 655 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 DPCDQ9BVM2 203 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM117Q9H0C3 514 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PLK3Q9H4B4 646 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 KCNG2Q9UJ96 466 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RPH3ALQ9UNE2 315 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF281Q9Y2X9 895 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NELFEP18615 380 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TPSB2P20231 275 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SSTR1P30872 391 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CAPSQ13938 189 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ENDOGQ14249 297 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TPSAB1Q15661 275 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 XAGE5Q8WWM1 108 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF75AQ96N20 296 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MRTO4Q9UKD2 239 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PKDREJQ9NTG1 2253 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TTC24A2A3L6 582 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NFKBIEO00221 500 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TLX2O43763 284 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MMP10P09238 476 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 AZGP1P25311 298 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CD34P28906 385 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TAS2R40P59535 323 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SNTB1Q13884 538 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 C17orf107Q6ZR85 190 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BAGE3Q86Y29 109 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BAGE2Q86Y30 109 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BLNKQ8WV28 456 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RLN3Q8WXF3 142 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 CNTNAP3Q9BZ76 1288 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 WASF3Q9UPY6 502 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ARAP3Q8WWN8 1544 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FAM24AA6NFZ4 105 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 LYRM1O43325 122 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RCBTB2O95199 551 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 RACK1P63244 317 aaKnown RBP3.57□□□□□ -1.84
SYNE2-202ENST00000344113 GBX1Q14549 363 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TRILQ7L0X0 811 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NLRC3Q7RTR2 1065 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FAM181AQ8N9Y4 354 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF610Q8N9Z0 462 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 GPRC5AQ8NFJ5 357 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PXT1Q8NFP0 134 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MRGPRX4Q96LA9 322 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF599Q96NL3 588 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 PUS1Q9Y606 427 aaKnown RBP eCLIP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms