RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 C1orf94Q6P1W5 598 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 Q6ZPB1 254 aaPredicted RBP14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 PLEKHM3Q6ZWE6 761 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 AHSA2Q719I0 299 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 OLIG3Q7RTU3 272 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 GPR151Q8TDV0 419 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 FAR1Q8WVX9 515 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 SGCDQ92629 289 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 RBM18Q96H35 190 aaKnown RBP14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 DGAT2Q96PD7 388 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 OR6C1Q96RD1 312 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 PRRG3Q9BZD7 231 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 QRSL1Q9H0R6 528 aaKnown RBP14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 GPN2Q9H9Y4 310 aaPredicted RBP14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF226Q9NYT6 803 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 REV1Q9UBZ9 1251 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 NDOR1Q9UHB4 597 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 MKLN1Q9UL63 735 aa14.1□□□□□ -0.15
TUBB4B-201ENST00000340384 AGAP5A6NIR3 686 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 EFCAB7A8K855 629 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 TMEM150CB9EJG8 249 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF749O43361 778 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 FOXS1O43638 330 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 KIAA0513O60268 411 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 FCMRO60667 390 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 GABRB1P18505 474 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 RPS4Y1P22090 263 aaKnown RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 HSD17B7P56937 341 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 SNRPGP62308 76 aaKnown RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 IGLV3-21P80748 117 aaPredicted RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 MGAT2Q10469 447 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 FOXD4Q12950 439 aaPredicted RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 SERTAD2Q14140 314 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 SMN1Q16637 294 aaKnown RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 SYT6Q5T7P8 510 aaPredicted RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 WDR53Q7Z5U6 358 aaPredicted RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 COMTD1Q86VU5 262 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 CACTIN-AS1Q8N1I8 211 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 AGBL5Q8NDL9 886 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 C9orf43Q8TAL5 461 aaPredicted RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 PIGXQ8TBF5 258 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 RIT1Q92963 219 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 RNF31Q96EP0 1072 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 LIN37Q96GY3 246 aaPredicted RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 MCHR1Q99705 422 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 FKBP14Q9NWM8 211 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 CNOT2Q9NZN8 540 aaKnown RBP14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 HCN3Q9P1Z3 774 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 SPTBP11277 2137 aa14.09□□□□□ -0.15
TUBB4B-201ENST00000340384 NKX2-2O95096 273 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 CDK1P06493 297 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 CSTF2P33240 577 aaKnown RBP eCLIP14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 GALNSP34059 522 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 MAP3K8P41279 467 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 MC2RQ01718 297 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 GPR68Q15743 365 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 TBCEQ15813 527 aaPredicted RBP14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 DECR1Q16698 335 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 ENTPD8Q5MY95 495 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 C12orf73Q69YU5 71 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF730Q6ZMV8 503 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 CCDC81Q6ZN84 652 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 ZNF836Q6ZNA1 936 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 TMPRSS12Q86WS5 348 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 ANKRD13BQ86YJ7 626 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 STX19Q8N4C7 294 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 MORN4Q8NDC4 146 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 DIO2Q92813 273 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 HOXB13Q92826 284 aaPredicted RBP14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 UBE2FQ969M7 185 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 MVB12AQ96EY5 273 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 MMABQ96EY8 250 aaPredicted RBP14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 PEX11GQ96HA9 241 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 DEPDC7Q96QD5 511 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 CTRCQ99895 268 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 WFDC6Q9BQY6 131 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 LMF2Q9BU23 707 aaKnown RBP14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 TEX12Q9BXU0 123 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 ACOT13Q9NPJ3 140 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 MAN2C1Q9NTJ4 1040 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 C14orf105Q9NVL8 296 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 LOXL2Q9Y4K0 774 aa14.08□□□□□ -0.15
TUBB4B-201ENST00000340384 NINQ8N4C6 2090 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 SPTBN4Q9H254 2564 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 TRIM64BA6NI03 449 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 CPSF4LA6NMK7 179 aaKnown RBP14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 PRAMEF2O60811 474 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 FADS2O95864 444 aaKnown RBP14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 NID1P14543 1247 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 PCSK6P29122 969 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 GABRA3P34903 492 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 EEF1A1P68104 462 aaKnown RBP14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 EXOSC7Q15024 291 aaKnown RBP14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 AP1ARQ63HQ0 302 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 RAB11FIP2Q7L804 512 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 TMPRSS7Q7RTY8 843 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 HMGN2P46Q86SG4 172 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 SLC38A9Q8NBW4 561 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 OR52R1Q8NGF1 315 aa14.08□□□□□ -0.16
TUBB4B-201ENST00000340384 OR8J1Q8NGP2 316 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms