RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 NDUFA9Q16795 377 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 ACSM3Q53FZ2 586 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 ALKAL2Q6UX46 152 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 ELMOD3Q96FG2 381 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 PRRC1Q96M27 445 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 CCDC86Q9H6F5 360 aaKnown RBP13.24□□□□□ -0.29
PCDH8-201ENST00000338862 C6orf106Q9H6K1 298 aaPredicted RBP13.24□□□□□ -0.29
PCDH8-201ENST00000338862 IRGMA1A4Y4 181 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 SIX6O95475 246 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 PPP1R3DO95685 299 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 PLATP00750 562 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 LCN1P31025 176 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 PCBP3P57721 371 aaKnown RBP13.24□□□□□ -0.29
PCDH8-201ENST00000338862 E2F1Q01094 437 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 SGCGQ13326 291 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 RAB33AQ14088 237 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 ESCO2Q56NI9 601 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 SLC44A3Q8N4M1 653 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 SIRT6Q8N6T7 355 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 SUN3Q8TAQ9 357 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 KRCC1Q9NPI7 259 aaPredicted RBP13.24□□□□□ -0.29
PCDH8-201ENST00000338862 MYEF2Q9P2K5 600 aaKnown RBP13.24□□□□□ -0.29
PCDH8-201ENST00000338862 DEC1Q9P2X7 70 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 MGAT4CQ9UBM8 478 aa13.24□□□□□ -0.29
PCDH8-201ENST00000338862 E9PI62 339 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 L7N2F9 121 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 SLC9A3R1O14745 358 aaPredicted RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 B4GALT2O60909 372 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 FGF18O76093 207 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 RGS11O94810 467 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 IFNA7P01567 189 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PRNPP04156 253 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 HK1P19367 917 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 LGALS3BPQ08380 585 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 C3orf38Q5JPI3 329 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 GATSQ8NAP1 163 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 OR13C2Q8NGS9 318 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 AMDHD1Q96NU7 426 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 LGR4Q9BXB1 951 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 OR52D1Q9H346 318 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 CERS4Q9HA82 394 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PRKAG2Q9UGJ0 569 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 RCE1Q9Y256 329 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 RALGAPA2Q2PPJ7 1873 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 FAM25EA8MYX2 175 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 APEHP13798 732 aaKnown RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 TRHRP34981 398 aaPredicted RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 DEFA5Q01523 94 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 MINDY4Q4G0A6 757 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 QSOX2Q6ZRP7 698 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 COX18Q8N8Q8 333 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 ACOT4Q8N9L9 421 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 ZNF680Q8NEM1 530 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PFN4Q8NHR9 129 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 OR7D2Q96RA2 312 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 LYSMD1Q96S90 227 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PDCD1LG2Q9BQ51 273 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 SLX1AQ9BQ83 275 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 CPEB1Q9BZB8 566 aaKnown RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 FN3KQ9H479 309 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 FOLH1BQ9HBA9 442 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 RPS6KB2Q9UBS0 482 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 MN1Q10571 1320 aaPredicted RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PTPRDP23468 1912 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 FOXE1O00358 373 aaPredicted RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 ARPC1BO15143 372 aaKnown RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 ARPC5O15511 151 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 MT-ND5P03915 603 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 TCRBP04435 133 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PIPP12273 146 aaPredicted RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PDX1P52945 283 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 SEC13P55735 322 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 AGERQ15109 404 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 FAM26DQ5JW98 314 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 C12orf73Q69YU5 71 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 LSM14AQ8ND56 463 aaKnown RBP13.23□□□□□ -0.29
PCDH8-201ENST00000338862 SDR9C7Q8NEX9 313 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 MED30Q96HR3 178 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 SEC22CQ9BRL7 303 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 RETREG1Q9H6L5 497 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 PRDM9Q9NQV7 894 aa13.23□□□□□ -0.29
PCDH8-201ENST00000338862 IGLV3-16A0A075B6K0 115 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ACOD1A6NK06 481 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 RNF13O43567 381 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SLC22A5O76082 557 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 HMGN1P05114 100 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 RHOP08100 348 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 RAB3BP20337 219 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 HMGA2P52926 109 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 MESP2Q0VG99 397 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 FGL2Q14314 439 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 NDUFAF6Q330K2 333 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 OR4Q3Q8NH05 313 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 LMLNQ96KR4 655 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ERMAPQ96PL5 475 aaPredicted RBP13.22□□□□□ -0.29
PCDH8-201ENST00000338862 ZDHHC5Q9C0B5 715 aa13.22□□□□□ -0.29
PCDH8-201ENST00000338862 KLHL42Q9P2K6 505 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms