RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 LOC102723996A0A087X1L8 192 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 NPIPB9F8W1W9 429 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 TO15178 435 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 BCAS1O75363 584 aaPredicted RBP13.54□□□□□ -0.24
CBX3-201ENST00000337620 THRBP10828 461 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 CEACAM1P13688 526 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 HPGDP15428 266 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 DAPP51397 102 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 NOVA1P51513 510 aaKnown RBP13.54□□□□□ -0.24
CBX3-201ENST00000337620 HMGA2P52926 109 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 RPS15P62841 145 aaKnown RBP13.54□□□□□ -0.24
CBX3-201ENST00000337620 MERTKQ12866 999 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 PCOLCEQ15113 449 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 MICAQ29983 383 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 BTBD16Q32M84 506 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 ZNF441Q8N8Z8 693 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 OR10G2Q8NGC3 310 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 PRRC1Q96M27 445 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 MCHR1Q99705 422 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 GABARAPL1Q9H0R8 117 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 FLRT3Q9NZU0 649 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 TMCC3Q9ULS5 477 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 NTNG1Q9Y2I2 539 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 ORC6Q9Y5N6 252 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 SDK2Q58EX2 2172 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 IGHV1-45A0A0A0MS14 117 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 TRBV4-1A0A0J9YWV2 114 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 TM4SF5O14894 197 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 ABCB7O75027 752 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 UTS2O95399 124 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 RAB40ALP0C0E4 278 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 PRG2P13727 222 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 MMP11P24347 488 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 ABCD3P28288 659 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 LIMS1P48059 325 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 NRG3P56975 720 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 SMIM11AP58511 58 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 CMPK2Q5EBM0 449 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 ENTPD8Q5MY95 495 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 DESI1Q6ICB0 168 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 GALNT5Q7Z7M9 940 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 NLGN4XQ8N0W4 816 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 SLC34A3Q8N130 599 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 C17orf47Q8NEP4 570 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 NLGN4YQ8NFZ3 816 aaPredicted RBP13.54□□□□□ -0.24
CBX3-201ENST00000337620 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
CBX3-201ENST00000337620 OMA1Q96E52 524 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 CNBD2Q96M20 576 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 ADI1Q9BV57 179 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 HOXD1Q9GZZ0 328 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 UBQLN4Q9NRR5 601 aa13.54□□□□□ -0.24
CBX3-201ENST00000337620 WWP2O00308 870 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 MITFO75030 526 aaPredicted RBP13.53□□□□□ -0.24
CBX3-201ENST00000337620 CYP7B1O75881 506 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 ZFAND5O76080 213 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 CCNB2O95067 398 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 IGHEP01854 428 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 IGFBP5P24593 272 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 OTX2P32243 289 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 IFNA8P32881 189 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 ZNF136P52737 540 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 GABREP78334 506 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 FGFBP1Q14512 234 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 DCST1Q5T197 706 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 PLEKHM3Q6ZWE6 761 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 RANBP3LQ86VV4 465 aaPredicted RBP13.53□□□□□ -0.24
CBX3-201ENST00000337620 DHRSXQ8N5I4 330 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 SLC5A8Q8N695 610 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 ZNF527Q8NB42 609 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 PIK3C3Q8NEB9 887 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 OR5L2Q8NGL0 311 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 TP53INP1Q96A56 240 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 ARSGQ96EG1 525 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 FEVQ99581 238 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 ZNF700Q9H0M5 742 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 TOR3AQ9H497 397 aa13.53□□□□□ -0.24
CBX3-201ENST00000337620 TMEFF2Q9UIK5 374 aaPredicted RBP13.53□□□□□ -0.24
CBX3-201ENST00000337620 SERINC4A6NH21 518 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 SCDO00767 359 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 DENRO43583 198 aaKnown RBP13.52□□□□□ -0.24
CBX3-201ENST00000337620 UBTFL6P0CB48 400 aaPredicted RBP13.52□□□□□ -0.24
CBX3-201ENST00000337620 COX6A1P12074 109 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 ELAVL4P26378 380 aaKnown RBP13.52□□□□□ -0.24
CBX3-201ENST00000337620 KLHL26Q53HC5 615 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 GATSQ8NAP1 163 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 OR9Q2Q8NGE9 314 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 NUBPLQ8TB37 319 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 ADAMTS16Q8TE57 1224 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 DHRS1Q96LJ7 313 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 DEFB126Q9BYW3 111 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 POLR1BQ9H9Y6 1135 aa13.52□□□□□ -0.24
CBX3-201ENST00000337620 ZBTB20Q9HC78 741 aaPredicted RBP13.52□□□□□ -0.24
CBX3-201ENST00000337620 A0A1W2PRQ8 180 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 STMND1H3BQB6 276 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 SOCS6O14544 535 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 TSPAN2O60636 221 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 ICOSLGO75144 302 aa13.52□□□□□ -0.25
CBX3-201ENST00000337620 OXSR1O95747 527 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms