RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 FAM111BQ6SJ93 734 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 C14orf80Q86SX3 495 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 MEX3DQ86XN8 651 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 NAGSQ8N159 534 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 GGHQ92820 318 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 F2RL3Q96RI0 385 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 NTPCRQ9BSD7 190 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ADAM19Q9H013 955 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SMCO4Q9NRQ5 59 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PTTG3PQ9NZH4 202 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SLC16A5O15375 505 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SDC3O75056 442 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SCGB2A1O75556 95 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ARSBP15848 533 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SELPP16109 830 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ACRV1P26436 265 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CXADRP78310 365 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 GPR50Q13585 617 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 VASNQ6EMK4 673 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 NIPAL3Q6P499 406 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM200AQ86VY9 491 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ADGRG5Q8IZF4 528 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 DUSP19Q8WTR2 217 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 UTP4Q969X6 686 aaKnown RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 L3HYPDHQ96EM0 354 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 MRGPRX2Q96LB1 330 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 OR11A1Q9GZK7 315 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PLEKHJ1Q9NW61 149 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 TAS2R16Q9NYV7 291 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 KIF25Q9UIL4 384 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SLC7A7Q9UM01 511 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 GGT3PA6NGU5 568 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 A6NLC8 198 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PPP1R2P9O14990 202 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CYTIPO60759 359 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SIX6O95475 246 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF33AQ06730 810 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 ECH1Q13011 328 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PLA2G7Q13093 441 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CRHR2Q13324 411 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 SLC9A3R2Q15599 337 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 CST9LP1Q5W188 147 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 BAGE3Q86Y29 109 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 BAGE2Q86Y30 109 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 LRRC25Q8N386 305 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 FUBP3Q96I24 572 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A6-201ENST00000334504 FN3KRPQ9HA64 309 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 PRODH2Q9UF12 536 aa9.28□□□□□ -0.92
COL4A6-201ENST00000334504 VSTM5A8MXK1 200 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 KIAA0355O15063 1070 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 ALX3O95076 343 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 RD3LP0DJH9 198 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 FDXRP22570 491 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 SHMT2P34897 504 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 PER3P56645 1201 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 CTXN1P60606 82 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 SELENOWP63302 87 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 TMEM115Q12893 351 aaPredicted RBP9.27□□□□□ -0.92
COL4A6-201ENST00000334504 EBPQ15125 230 aaKnown RBP9.27□□□□□ -0.92
COL4A6-201ENST00000334504 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 NPAS4Q8IUM7 802 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 MRI1Q9BV20 369 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 NID2Q14112 1375 aa9.27□□□□□ -0.92
COL4A6-201ENST00000334504 C20orf202A1L168 122 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CLDN24A6NM45 220 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 G3V2L1 256 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 SERPINE2P07093 398 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 HEXBP07686 556 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CD53P19397 219 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CLDN6P56747 220 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 RPP30P78346 268 aaKnown RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 MALLQ13021 153 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CGB2Q6NT52 195 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 GLB1L2Q8IW92 636 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 CYB561A3Q8NBI2 242 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 C14orf79Q96F83 325 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 NKX6-2Q9C056 277 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 GALNT9Q9HCQ5 603 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 POLMQ9NP87 494 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 RIMS3Q9UJD0 308 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 OSGIN1Q9UJX0 560 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 A6NCN8 305 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 AGAP14A8MT82 685 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 C9J4A7 227 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 M0R3H8 397 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 ASGR2P07307 311 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 LAMP1P11279 417 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 POLR2CP19387 275 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 MRPL49Q13405 166 aaKnown RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 LAX1Q8IWV1 398 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 PLPP5Q8NEB5 264 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 B3GNT2Q9NY97 397 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 C1orf226A1L170 272 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 MEGF11A6BM72 1044 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 C21orf33P30042 268 aaPredicted RBP9.27□□□□□ -0.93
COL4A6-201ENST00000334504 TAS2R19P59542 299 aa9.27□□□□□ -0.93
COL4A6-201ENST00000334504 ARHGAP1Q07960 439 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms