RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 H3F3CQ6NXT2 135 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 RNF180Q86T96 592 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PDZD3Q86UT5 571 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR4N4Q8N0Y3 316 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR6V1Q8N148 313 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 HS3ST4Q9Y661 456 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 WNT10BO00744 389 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SOCS5O75159 536 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 BEST1O76090 585 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ELK1P19419 428 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PRSS3P35030 304 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SMN1Q16637 294 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PLEKHS1Q5SXH7 462 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GDPD3Q7L5L3 318 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR6M1Q8NGM8 313 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR52P1PQ8NH57 321 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ADAMTS14Q8WXS8 1223 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 C1orf74Q96LT6 269 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SLCO3A1Q9UIG8 710 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 BACE2Q9Y5Z0 518 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM14AQ9Y6G1 99 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 A0A1B0GVT2 93 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SLC33A1O00400 549 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 NDUFS4O43181 175 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 HCKP08631 526 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PBX2P40425 430 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GDF5P43026 501 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TLE3Q04726 772 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 AWAT2Q6E213 333 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 NADSYN1Q6IA69 706 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 KDELC1Q6UW63 502 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 NLRC3Q7RTR2 1065 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GALNT10Q86SR1 603 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 HAS2Q92819 552 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GPATCH2Q9NW75 528 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 A0A1W2PPK0 400 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PHYHO14832 338 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SPI1P17947 270 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 CPT2P23786 658 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 KCNJ5P48544 419 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SEC61A1P61619 476 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PDZK1IP1Q13113 114 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GPR50Q13585 617 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 CD163Q86VB7 1156 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 RRNAD1Q96FB5 475 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF300Q96RE9 604 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 MBOAT4Q96T53 435 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GPR20Q99678 358 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ORAI3Q9BRQ5 295 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM175Q9BSA9 504 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 NMNAT1Q9HAN9 279 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PRDM9Q9NQV7 894 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 ABRACLQ9P1F3 81 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 GRHPRQ9UBQ7 328 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 PCDHGA6Q9Y5G7 932 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 SLC16A5O15375 505 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 RPS13P62277 151 aaKnown RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 MANEALQ5VSG8 457 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 FBXO15Q8NCQ5 510 aaPredicted RBP6.68□□□□□ -1.34
SMC1A-201ENST00000322213 TGIF2Q9GZN2 237 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 CTPS2Q9NRF8 586 aa6.68□□□□□ -1.34
SMC1A-201ENST00000322213 OR5K3A6NET4 321 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ARL5CA6NH57 179 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GAPDHSO14556 408 aaPredicted RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 IL12BP29460 328 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GGT5P36269 586 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PRAMEF14Q5SWL7 426 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TREML2Q5T2D2 321 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 WDTC1Q8N5D0 677 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLC30A7Q8NEW0 376 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR10R2Q8NGX6 335 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM163Q8TC26 289 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 C2CD4CQ8TF44 421 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SFXN2Q96NB2 322 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CDCA4Q9BXL8 241 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GALNT9Q9HCQ5 603 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CRTAC1Q9NQ79 661 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ACSM4P0C7M7 580 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PSMB1P20618 241 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 LIPAP38571 399 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 GPR4P46093 362 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLAMF1Q13291 335 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CTU2Q2VPK5 515 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PLPP5Q8NEB5 264 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 STEAP2Q8NFT2 490 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NSMAFQ92636 917 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 MICU1Q9BPX6 476 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 SLIRPQ9GZT3 109 aaKnown RBP6.67□□□□□ -1.34
SMC1A-201ENST00000322213 RHBGQ9H310 441 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 CPA4Q9UI42 421 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 PCDHGC4Q9Y5F7 938 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 HCRTR2O43614 444 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 OR2C1O95371 312 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 TGFB1P01137 390 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 ERVPABLB-1P60509 514 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 HERV-K104P61576 105 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 NFATC2Q13469 925 aa6.67□□□□□ -1.34
SMC1A-201ENST00000322213 YIF1BQ5BJH7 314 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms