RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 MAGEA11P43364 429 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 MNX1P50219 401 aaPredicted RBP7.08□□□□□ -1.28
CDHR3-201ENST00000317716 SQSTM1Q13501 440 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 TRAM2Q15035 370 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 SEC23BQ15437 767 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 USF2Q15853 346 aaPredicted RBP7.08□□□□□ -1.28
CDHR3-201ENST00000317716 SYT14P1Q58G82 188 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 FAHD1Q6P587 224 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 FAM171BQ6P995 826 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 LRRTM4Q86VH4 590 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 TEX19Q8NA77 164 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 BBS1Q8NFJ9 593 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 FCAMRQ8WWV6 532 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 MSLNLQ96KJ4 702 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 KXD1Q9BQD3 176 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 CXorf36Q9H7Y0 433 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 GSKIPQ9P0R6 139 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 CDH10Q9Y6N8 788 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 LCTP09848 1927 aa7.08□□□□□ -1.28
CDHR3-201ENST00000317716 GXYLT2A0PJZ3 443 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 RAB19A4D1S5 217 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 GPR37L1O60883 481 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ATG12O94817 140 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NTN1O95631 604 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 EOMESO95936 686 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 IFNA6P05013 189 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 C8AP07357 584 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 MMP11P24347 488 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 KHKP50053 298 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 SUOXP51687 545 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 TAP2Q03519 686 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF33BQ06732 778 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 TMEM115Q12893 351 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ELOAQ14241 798 aaKnown RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF750Q32MQ0 723 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 KRBOX4Q5JUW0 171 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 LIPJQ5W064 366 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 PYHIN1Q6K0P9 492 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NLRC3Q7RTR2 1065 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 YAF2Q8IY57 180 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NANOGP1Q8N7R0 232 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 FANK1Q8TC84 345 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 C4orf36Q96KX1 117 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 LMF1Q96S06 567 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF559Q9BR84 538 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 SLC12A9Q9BXP2 914 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ABCG4Q9H172 646 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 CSNK1G1Q9HCP0 422 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ASAH2Q9NR71 780 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 CLDND1Q9NY35 253 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 MRTO4Q9UKD2 239 aaKnown RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 MRPS23Q9Y3D9 190 aaKnown RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 V9GYH0 126 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 CCDC88CQ9P219 2028 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 hCG_1807616A0A1W2PRN6 198 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 OR10H2O60403 315 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 MMP20O60882 483 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ARL6IP5O75915 188 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 KRT33AO76009 404 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 GLAP06280 429 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ACSM4P0C7M7 580 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ZNF8P17098 575 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ELAVL4P26378 380 aaKnown RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 GDNFP39905 211 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 PRR5P85299 388 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 GPR17Q13304 367 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 GNA13Q14344 377 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 COL28A1Q2UY09 1125 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 LRIF1Q5T3J3 769 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 VASNQ6EMK4 673 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ZC3H14Q6PJT7 736 aaKnown RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 LIPIQ6XZB0 460 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 FAM124AQ86V42 546 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NUDT13Q86X67 352 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 VRK2Q86Y07 508 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 BEST3Q8N1M1 668 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 MS4A15Q8N5U1 240 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 CLDN22Q8N7P3 220 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 KIAA1958Q8N8K9 716 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 INO80EQ8NBZ0 244 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 OR6T1Q8NGN1 323 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 OR5W2Q8NH69 310 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 HAVCR2Q8TDQ0 301 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 DUSP19Q8WTR2 217 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 PMM1Q92871 262 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 S100A16Q96FQ6 103 aaKnown RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 LINC00052Q96N35 136 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 C12orf57Q99622 126 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NKX3-1Q99801 234 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 TREX2Q9BQ50 279 aaPredicted RBP7.07□□□□□ -1.28
CDHR3-201ENST00000317716 TMEM43Q9BTV4 400 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 WDR26Q9H7D7 661 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 AUNIPQ9H7T9 357 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NOX3Q9HBY0 568 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 ERVK-19Q9WJR5 959 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NUBP2Q9Y5Y2 271 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 GVINP1Q7Z2Y8 2422 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 BLOC1S5-TXNDC5H3BN57 136 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 NDUFS4O43181 175 aa7.07□□□□□ -1.28
CDHR3-201ENST00000317716 PI15O43692 258 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms