RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PEPDP12955 493 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 POU3F2P20265 443 aaPredicted RBP17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 CCT3P49368 545 aaKnown RBP17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 GLYR1Q49A26 553 aaPredicted RBP17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 SZRD1Q7Z422 152 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 GGNQ86UU5 652 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 COX18Q8N8Q8 333 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 CDS1Q92903 461 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 PPP1R36Q96LQ0 422 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 ZFP3Q96NJ6 502 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 ZNF559Q9BR84 538 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 DUSP26Q9BV47 211 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 BTBD2Q9BX70 525 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 TBL1XR1Q9BZK7 514 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 NOP53Q9NZM5 478 aaKnown RBP17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 CTAG2O75638 210 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 LCN1P31025 176 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 UQCRC1P31930 480 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 OPRM1P35372 400 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 PRIM2P49643 509 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 RPL14P50914 215 aaKnown RBP17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 DGKQP52824 942 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 BEND6Q5SZJ8 279 aaPredicted RBP17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 RAET1LQ5VY80 246 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 ZZZ3Q8IYH5 903 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 CLECL1Q8IZS7 167 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 GCNT2Q8N0V5 402 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 NATD1Q8N6N6 113 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 PPP1R14CQ8TAE6 165 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 SFXN5Q8TD22 340 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 FIG4Q92562 907 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 INTS12Q96CB8 462 aaKnown RBP17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 DTNBP1Q96EV8 351 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 TM9SF2Q99805 663 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 SFXN3Q9BWM7 321 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 CENPHQ9H3R5 247 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 NEUROD4Q9HD90 331 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 ATAD3AQ9NVI7 634 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 PNPOQ9NVS9 261 aa17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 EIF3LQ9Y262 564 aaKnown RBP17.87■□□□□ 0.45
PDZRN3-202ENST00000308537 A0A1W2PQD3 144 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 OIP5O43482 229 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 MYZAPP0CAP1 466 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 DDX5P17844 614 aaKnown RBP17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 POU6F2P78424 691 aaPredicted RBP17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 MYBPHQ13203 477 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 MAD2L1Q13257 205 aaPredicted RBP17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 GUSBP1Q15486 140 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 OR4F3Q6IEY1 312 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 CDH24Q86UP0 819 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 GATSQ8NAP1 163 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 OR8J2Q8NGG1 315 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 OR56A1Q8NGH5 318 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 POC1BQ8TC44 478 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 NRGNQ92686 78 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 ZNF524Q96C55 264 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 ADGRG7Q96K78 797 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 ACTRT3Q9BYD9 372 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 NUF2Q9BZD4 464 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 PTGES2Q9H7Z7 377 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 MEAF6Q9HAF1 191 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 SLC24A3Q9HC58 644 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 UBQLN4Q9NRR5 601 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 FOXD3Q9UJU5 478 aaPredicted RBP17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 SNX8Q9Y5X2 465 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 MED13LQ71F56 2210 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 MTORP42345 2549 aa17.86■□□□□ 0.45
PDZRN3-202ENST00000308537 A0A1W2PNV4 684 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 TMEM120BA0PK00 339 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 C7orf72A4D263 438 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 LINC01387J3KSC0 135 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 NDUFB5O43674 189 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 SNNO75324 88 aaPredicted RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 SNUPNO95149 360 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 ALDOCP09972 364 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 KIR2DL3P43628 341 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 PRRC2AP48634 2157 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 CLK3P49761 638 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 TP53BP2Q13625 1128 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 CTU2Q2VPK5 515 aaKnown RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 FLYWCH1Q4VC44 716 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 UBQLNLQ8IYU4 475 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 LRRC34Q8IZ02 419 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 CLEC4FQ8N1N0 589 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 METTL25Q8N6Q8 603 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 OR5AK3PQ8NH89 298 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 GOT1L1Q8NHS2 421 aaPredicted RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 JADE3Q92613 823 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 TLCD1Q96CP7 247 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 ZNF845Q96IR2 970 aaPredicted RBP17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 PIGQQ9BRB3 760 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 KCNK9Q9NPC2 374 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 ITPR3Q14573 2671 aa17.85■□□□□ 0.45
PDZRN3-202ENST00000308537 NPIPA5A0A0B4J1W7 369 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 NPIPA7E9PJI5 369 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 H3BML4 177 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 SDHDO14521 159 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 GMFGO60234 142 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 TNFRSF21O75509 655 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms