RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SLC6A18Q96N87 628 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 TSNAXQ99598 290 aaKnown RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 TMEM168Q9H0V1 697 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 ABCG4Q9H172 646 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 C20orf85Q9H1P6 137 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 FGF20Q9NP95 211 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 LYARQ9NX58 379 aaKnown RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 GNG8Q9UK08 70 aa12.23□□□□□ -0.45
TRIM35-201ENST00000305364 RP1L1Q8IWN7 2480 aaPredicted RBP12.23□□□□□ -0.45
TRIM35-201ENST00000305364 A0A0B4J203 849 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 INPPL1O15357 1258 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 UBL3O95164 117 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CD160O95971 181 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PGGHGQ32M88 737 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TMEM69Q5SWH9 247 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OAFQ86UD1 273 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 C4orf36Q96KX1 117 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 NOX3Q9HBY0 568 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CYSLTR2Q9NS75 346 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 RLFQ13129 1914 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TOR1AO14656 332 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 SLC2A10O95528 541 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 HOXB9P17482 250 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CENPAP49450 140 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 MGAT3Q09327 533 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ST3GAL2Q16842 350 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 KHDRBS2Q5VWX1 349 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TMEM107Q6UX40 140 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 APOOLQ6UXV4 268 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TAS1R1Q7RTX1 841 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 LRRC56Q8IYG6 542 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OR11H4Q8NGC9 324 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OR6K6Q8NGW6 343 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TANC1Q9C0D5 1861 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PLXNA1Q9UIW2 1896 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ZC3H12DA2A288 527 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ERI3O43414 337 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 SOX30O94993 753 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ECDO95905 644 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 INHAP05111 366 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 HMGN2P05204 90 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 NAA10P41227 235 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CCR8P51685 355 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ZXDCQ2QGD7 858 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 LRRC37A5PQ49AS3 106 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 SLC9B2Q86UD5 537 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 RANBP3LQ86VV4 465 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ADGRG3Q86Y34 549 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OR51L1Q8NGJ5 315 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OR8D4Q8NGM9 314 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CYB5D2Q8WUJ1 264 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 SLC22A12Q96S37 553 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ABHD1Q96SE0 405 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 DPH1Q9BZG8 443 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 MS4A7Q9GZW8 240 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 RHBGQ9H310 441 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CWH43Q9H720 699 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TCF7L1Q9HCS4 588 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 A4GALTQ9NPC4 353 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TDP1Q9NUW8 608 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OR14I1A6ND48 311 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 GNB5O14775 395 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PRAF2O60831 178 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CSNK2A2P19784 350 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PCBP3P57721 371 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 TRAM1Q15629 374 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 HACD4Q5VWC8 232 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 LIPIQ6XZB0 460 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 CAMKMTQ7Z624 323 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OR52N1Q8NH53 320 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 MYLIPQ8WY64 445 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 OTUB2Q96DC9 234 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 KLF16Q9BXK1 252 aaPredicted RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 RNF32Q9H0A6 362 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 SMG9Q9H0W8 520 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 KLHL31Q9H511 634 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PRDM9Q9NQV7 894 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 PARP14Q460N5 1801 aa12.22□□□□□ -0.45
TRIM35-201ENST00000305364 POLR2AP24928 1970 aaKnown RBP12.22□□□□□ -0.45
TRIM35-201ENST00000305364 ZNF879B4DU55 563 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 HMGN4O00479 90 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 LEFTY1O75610 366 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 GYPBP06028 91 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 NPPBP16860 134 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 NPR2P20594 1047 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 CTNNB1P35222 781 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 FGL2Q14314 439 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 GK2Q14410 553 aaPredicted RBP12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TCEA2Q15560 299 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 TP53I3Q53FA7 332 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 VRK2Q86Y07 508 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 RASGEF1AQ8N9B8 481 aa12.21□□□□□ -0.45
TRIM35-201ENST00000305364 FAM181AQ8N9Y4 354 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms