RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GPM6BQ13491 265 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 FCN2Q15485 313 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 FAHD1Q6P587 224 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 VASH1Q7L8A9 365 aaPredicted RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 ARL14Q8N4G2 192 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 LINC00471Q8N535 108 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 WFIKKN2Q8TEU8 576 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 SETD7Q8WTS6 366 aaKnown RBP12.48□□□□□ -0.41
CASC4-201ENST00000299957 FN3KQ9H479 309 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 HHATLQ9HCP6 504 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 C12orf4Q9NQ89 552 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 MGAT4CQ9UBM8 478 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 KCNE3Q9Y6H6 103 aa12.48□□□□□ -0.41
CASC4-201ENST00000299957 ZNF670-ZNF695F2Z2N8 137 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 UBXN7O94888 489 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 RAB3BP20337 219 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 MMP12P39900 470 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 HTR3AP46098 478 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 PSMA6P60900 246 aaKnown RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 MLLT11Q13015 90 aaPredicted RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 HNRNPA1L2Q32P51 320 aaKnown RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 HSD17B12Q53GQ0 312 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 MPP7Q5T2T1 576 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 NLRP8Q86W28 1048 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 SFTPA1Q8IWL2 248 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 TRMT2BQ96GJ1 504 aaKnown RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 IER3IP1Q9Y5U9 82 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 ZDBF2Q9HCK1 2354 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 A0A1W2PS29 197 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 KIAA0355O15063 1070 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 PTGS2P35354 604 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 RPS27P42677 84 aaKnown RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 SLC7A9P82251 487 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 EIF4EBP2Q13542 120 aaPredicted RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 CST6Q15828 149 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 HENMT1Q5T8I9 393 aaKnown RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 DPPA4Q7L190 304 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 ASPGQ86U10 573 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 OR5W2Q8NH69 310 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 PEX11GQ96HA9 241 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 TXNDC15Q96J42 360 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
CASC4-201ENST00000299957 MAU2Q9Y6X3 613 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 TRPM6Q9BX84 2022 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 MED12Q93074 2177 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 HMGN4O00479 90 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 CSTAP01040 98 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 MYOGP15173 224 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 ITGA3P26006 1051 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 LCN1P31025 176 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 SKP1P63208 163 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 ILKQ13418 452 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 EIPR1Q53HC9 387 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 IRAK1BP1Q5VVH5 260 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 PRR22Q8IZ63 422 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 CREB3L4Q8TEY5 395 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 VN1R3Q9BXE9 311 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 TMPRSS11EQ9UL52 423 aa12.47□□□□□ -0.41
CASC4-201ENST00000299957 TRBV5-4A0A0C4DH59 114 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 SLC5A10A0PJK1 596 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 H7C1C5 153 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 ARL6IP5O75915 188 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 H2AFB2P0C5Z0 115 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 KCNJ5P48544 419 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 LCN6P62502 163 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 ADIPOR2Q86V24 386 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 CEP76Q8TAP6 659 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 NSMAFQ92636 917 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 PRRC1Q96M27 445 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 OR51B4Q9Y5P0 310 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 LRRN3E7EW58 273 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 CLDN4O14493 209 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 VEGFDO43915 354 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 LATS1O95835 1130 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 GUCA1AP43080 201 aaPredicted RBP12.46□□□□□ -0.41
CASC4-201ENST00000299957 PDX1P52945 283 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 OR10A3P58181 314 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
CASC4-201ENST00000299957 FABP5Q01469 135 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 TMEM69Q5SWH9 247 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
CASC4-201ENST00000299957 OR2L2Q8NH16 312 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 ARL6Q9H0F7 186 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 LRRN3Q9H3W5 708 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 MBNL1Q9NR56 388 aaKnown RBP12.46□□□□□ -0.41
CASC4-201ENST00000299957 DOCK6Q96HP0 2047 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 SDK2Q58EX2 2172 aa12.46□□□□□ -0.41
CASC4-201ENST00000299957 CDC14CA4D256 554 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 SGK494L7N484 410 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 ARPC5O15511 151 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 HBQ1P09105 142 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 ERVK-25P63136 954 aa12.46□□□□□ -0.42
CASC4-201ENST00000299957 POU6F2P78424 691 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms