RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MCHR1Q99705 422 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 RASSF1Q9NS23 344 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
C9orf3-202ENST00000297979 IGKV3D-11A0A0A0MRZ8 115 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 IGHV5-10-1A0A0J9YXX1 117 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 TRIM64BA6NI03 449 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ABCB7O75027 752 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 CYP7B1O75881 506 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 SYPP08247 313 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 RFX3P48380 749 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 CRISP1P54107 249 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 HOXC5Q00444 222 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 TARDBPQ13148 414 aaKnown RBP eCLIP13.21□□□□□ -0.29
C9orf3-202ENST00000297979 TRAM2Q15035 370 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 FLYWCH1Q4VC44 716 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.29
C9orf3-202ENST00000297979 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF615Q8N8J6 731 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 IFI44Q8TCB0 444 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 SLC38A4Q969I6 547 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 TMIGD2Q96BF3 282 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 Q9N2J8 555 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 SEMA4GQ9NTN9 838 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 FTSJ1Q9UET6 329 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 PRODH2Q9UF12 536 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ATPIF1Q9UII2 106 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 RNF6Q9Y252 685 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 XPNPEP2O43895 674 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 CKMT1AP12532 417 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 OSMP13725 252 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 CHMP24386 653 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 IDH2P48735 452 aaKnown RBP13.21□□□□□ -0.29
C9orf3-202ENST00000297979 DAB2P98082 770 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 PTGES3Q15185 160 aaKnown RBP13.21□□□□□ -0.29
C9orf3-202ENST00000297979 CNPY1Q3B7I2 92 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 LAIR1Q6GTX8 287 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 BTN2A1Q7KYR7 527 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ZAR1Q86SH2 424 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 RANBP3LQ86VV4 465 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-202ENST00000297979 DEPDC4Q8N2C3 294 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 RCBTB1Q8NDN9 531 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 OR4N2Q8NGD1 307 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 TSLPQ969D9 159 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 UBE2FQ969M7 185 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 ARMC7Q9H6L4 198 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 VCX3AQ9NNX9 186 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.29
C9orf3-202ENST00000297979 REV1Q9UBZ9 1251 aa13.21□□□□□ -0.29
C9orf3-202ENST00000297979 CDHR4A6H8M9 788 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 CCDC160A6NGH7 325 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 OR5F1O95221 314 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 CLPSP04118 112 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 GPR141Q7Z602 305 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 PTPMT1Q8WUK0 201 aaPredicted RBP13.21□□□□□ -0.3
C9orf3-202ENST00000297979 APH1BQ8WW43 257 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 CCDC74BQ96LY2 380 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 GTPBP2Q9BX10 602 aaKnown RBP13.21□□□□□ -0.3
C9orf3-202ENST00000297979 ITPAQ9BY32 194 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 POLR2J3Q9H1A7 115 aaKnown RBP13.21□□□□□ -0.3
C9orf3-202ENST00000297979 PAK1IP1Q9NWT1 392 aaPredicted RBP13.21□□□□□ -0.3
C9orf3-202ENST00000297979 SCN3BQ9NY72 215 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 TPRKBQ9Y3C4 175 aa13.21□□□□□ -0.3
C9orf3-202ENST00000297979 ZDBF2Q9HCK1 2354 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 ZAR1LA6NP61 321 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 DYRK3O43781 588 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
C9orf3-202ENST00000297979 HTR1AP08908 422 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 SP9P0CG40 484 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CDK4P11802 303 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 EVI2BP34910 448 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 ZNF136P52737 540 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 RHAGQ02094 409 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 TUBA3CQ13748 450 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 LPAL2Q16609 132 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 RHBDD2Q6NTF9 364 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CORO6Q6QEF8 472 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 NLGN4XQ8N0W4 816 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 OR6C1Q96RD1 312 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 MKKSQ9NPJ1 570 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-202ENST00000297979 NTNG1Q9Y2I2 539 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 A0A087WUU8 490 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 PTGES3LE9PB15 166 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 BPNT1O95861 308 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 IGKV1D-16P01601 117 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CT45A8P0DMV1 189 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CT45A9P0DMV2 189 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 MMP11P24347 488 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 KRT20P35900 424 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CDC42P60953 191 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 ILKQ13418 452 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 NEDD8Q15843 81 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CT45A2Q5DJT8 189 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 VWA2Q5GFL6 755 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 C1orf94Q6P1W5 598 aa13.2□□□□□ -0.3
C9orf3-202ENST00000297979 CD300LDQ6UXZ3 194 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms