RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SOCS6O14544 535 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MAGEB3O15480 346 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DDAH2O95865 285 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ARAFP10398 606 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MATN1P21941 496 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MMP11P24347 488 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 GSK3BP49841 420 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 EFNA3P52797 238 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CLDN6P56747 220 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MTPNP58546 118 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DNASE1L3Q13609 305 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CEACAM7Q14002 265 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MYBPC3Q14896 1274 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 STK11Q15831 433 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 GTDC1Q4AE62 458 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 BROXQ5VW32 411 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SPATC1Q76KD6 591 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 TIPARPQ7Z3E1 657 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 RNF130Q86XS8 419 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 OR2T12Q8NG77 320 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC2A12Q8TD20 617 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 GRHL3Q8TE85 626 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 TSLPQ969D9 159 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 NKD1Q969G9 470 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DUS3LQ96G46 650 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 BDH2Q9BUT1 245 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MARCH7Q9H992 704 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 P2RX2Q9UBL9 471 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 TCFL5Q9UL49 500 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 WASF3Q9UPY6 502 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 FARSAQ9Y285 508 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ELOVL7A1L3X0 281 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 PMS2P1A4D2B8 440 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 TRIM3O75382 744 aaPredicted RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 EEF1A2Q05639 463 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 LTB4RQ15722 352 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 NRF1Q16656 503 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 BTBD16Q32M84 506 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 RABL3Q5HYI8 236 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 NDUFAF7Q7L592 441 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 OR4N5Q8IXE1 308 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DND1Q8IYX4 353 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CATSPER1Q8NEC5 780 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 NFAM1Q8NET5 270 aaPredicted RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 B3GNT7Q8NFL0 401 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 BBS10Q8TAM1 723 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 PIGUQ9H490 435 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SOX17Q9H6I2 414 aaPredicted RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SERINC1Q9NRX5 453 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ACTR3BQ9P1U1 418 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 MYO15AQ9UKN7 3530 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 FER1L5A0AVI2 2057 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 FRG2CA6NGY1 282 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 TO15178 435 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ACOX3O15254 700 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 CLOCKO15516 846 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 NKX2-2O95096 273 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 HPP00738 406 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ACADSP16219 412 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 RCVRNP35243 200 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 CORO7P57737 925 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ARG2P78540 354 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ERV3-1Q14264 604 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 INAQ16352 499 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 SFT2D3Q587I9 215 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM69BQ5VUD6 431 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM111BQ6SJ93 734 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF605Q86T29 641 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ARMC10Q8N2F6 343 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF441Q8N8Z8 693 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ABHD5Q8WTS1 349 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM122AQ96E09 287 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC39A3Q9BRY0 314 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 OR10A5Q9H207 317 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 TPK1Q9H3S4 243 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 IKZF5Q9H5V7 419 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 FOLH1BQ9HBA9 442 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 PLGRKTQ9HBL7 147 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 BCL2L10Q9HD36 194 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 MED31Q9Y3C7 131 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 A0A1W2PS29 197 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 PRORSD1PA6NEY8 169 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 A6NLC8 198 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 HMGN4O00479 90 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 VLDLRP98155 873 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 MRPL28Q13084 256 aaKnown RBP7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 DUSP8Q13202 625 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 NEDD8Q15843 81 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 EXOC3L2Q2M3D2 409 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 ARHGAP11BQ3KRB8 267 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 DGAT2L6Q6ZPD8 337 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 PTOV1Q86YD1 416 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 OR8H2Q8N162 312 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 C11orf65Q8NCR3 313 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 OR52R1Q8NGF1 315 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 NUBPLQ8TB37 319 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 VSTM2LQ96N03 204 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 DGCR6LQ9BY27 220 aa7.81□□□□□ -1.16
PTPDC1-201ENST00000288976 OR51I1Q9H343 314 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms