RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 SH3D21A4FU49 640 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 TDGF1P13385 188 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 ALAS2P22557 587 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 MMP11P24347 488 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 CLK1P49759 484 aaKnown RBP14.21□□□□□ -0.13
SF3B4-201ENST00000271628 PSG6Q00889 435 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 PLEKHM3Q6ZWE6 761 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 MMP27Q9H306 513 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 FKBP14Q9NWM8 211 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 MMACHCQ9Y4U1 282 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 CLDN16Q9Y5I7 305 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 A3GALT2U3KPV4 340 aa14.21□□□□□ -0.13
SF3B4-201ENST00000271628 TGFBR3LH3BV60 316 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 FRS3O43559 492 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 KCNK2O95069 426 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 CDK1P06493 297 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 TGM1P22735 817 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 CD40LGP29965 261 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 CNR2P34972 360 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 TRHRP34981 398 aaPredicted RBP14.21□□□□□ -0.14
SF3B4-201ENST00000271628 PPP5CP53041 499 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 FUT7Q11130 342 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 ZNF267Q14586 743 aaPredicted RBP14.21□□□□□ -0.14
SF3B4-201ENST00000271628 DECR1Q16698 335 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 SNAP47Q5SQN1 464 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 PERM1Q5SV97 790 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 YOD1Q5VVQ6 348 aaPredicted RBP14.21□□□□□ -0.14
SF3B4-201ENST00000271628 FIGNL1Q6PIW4 674 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 PTCHD4Q6ZW05 846 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 METTL27Q8N6F8 245 aaPredicted RBP14.21□□□□□ -0.14
SF3B4-201ENST00000271628 GNPDA2Q8TDQ7 276 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 ACOT11Q8WXI4 607 aaPredicted RBP14.21□□□□□ -0.14
SF3B4-201ENST00000271628 EDAQ92838 391 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 NDC1Q9BTX1 674 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 SEMA4GQ9NTN9 838 aa14.21□□□□□ -0.14
SF3B4-201ENST00000271628 CDHR4A6H8M9 788 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 YKT6O15498 198 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 AIREO43918 545 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 PDGFBP01127 241 aaPredicted RBP14.2□□□□□ -0.14
SF3B4-201ENST00000271628 IFNA16P05015 189 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 MAOAP21397 527 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 CSF2RBP32927 897 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 IFITM3Q01628 133 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 SQSTM1Q13501 440 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 MAPK14Q16539 360 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 PLK5Q496M5 336 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 SLX4IPQ5VYV7 408 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 TMEM236Q5W0B7 351 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 TUBA3EQ6PEY2 450 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 CASP12Q6UXS9 341 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 ZNF730Q6ZMV8 503 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 CCDC103Q8IW40 242 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 MCFD2Q8NI22 146 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 SLC41A3Q96GZ6 507 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 Q96MT0 163 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 VSTM2LQ96N03 204 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 DACH2Q96NX9 599 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 DCSTAMPQ9H295 470 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 DSN1Q9H410 356 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 ZNF768Q9H5H4 540 aaKnown RBP14.2□□□□□ -0.14
SF3B4-201ENST00000271628 SPTBP11277 2137 aa14.2□□□□□ -0.14
SF3B4-201ENST00000271628 GXYLT2A0PJZ3 443 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 DYRK3O43781 588 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 FMO6PO60774 539 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 TNNI3P19429 210 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 SSTR4P31391 388 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 NR0B2Q15466 257 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 ZSWIM7Q19AV6 140 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 ZNF404Q494X3 552 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 FLYWCH1Q4VC44 716 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 MRPL2Q5T653 305 aaKnown RBP14.19□□□□□ -0.14
SF3B4-201ENST00000271628 TMEM71Q6P5X7 295 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 PLEKHG7Q6ZR37 379 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 OR4C6Q8NH72 309 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 OR1L3Q8NH93 324 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 SAP25Q8TEE9 199 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 GGHQ92820 318 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 RPL3LQ92901 407 aaKnown RBP14.19□□□□□ -0.14
SF3B4-201ENST00000271628 CCDC74AQ96AQ1 378 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 PTCHD1Q96NR3 888 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 G6PC3Q9BUM1 346 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 PRR14Q9BWN1 585 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 YIPF2Q9BWQ6 316 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 OR10A5Q9H207 317 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 CAPN10Q9HC96 672 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 Q9N2J8 555 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 KRCC1Q9NPI7 259 aaPredicted RBP14.19□□□□□ -0.14
SF3B4-201ENST00000271628 FBXO34Q9NWN3 711 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 CLN6Q9NWW5 311 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 PRODH2Q9UF12 536 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.19□□□□□ -0.14
SF3B4-201ENST00000271628 MAU2Q9Y6X3 613 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 CACNA1EQ15878 2313 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 ISPDA4D126 451 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 A8MU76 341 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 PEX12O00623 359 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 FOLR1P15328 257 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 C21orf33P30042 268 aaPredicted RBP14.19□□□□□ -0.14
SF3B4-201ENST00000271628 LIPAP38571 399 aa14.19□□□□□ -0.14
SF3B4-201ENST00000271628 GCGRP47871 477 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms