RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 STOX2Q9P2F5 926 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 KLK11Q9UBX7 282 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 IKZF2Q9UKS7 526 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 A0A0G2JLL6 359 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 FEZF1A0PJY2 475 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 GCM2O75603 506 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 PAK4O96013 591 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 ZNF8P17098 575 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 SYN1P17600 705 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 ITGA3P26006 1051 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 PDSS1Q5T2R2 415 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 HEPHL1Q6MZM0 1159 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 PRRT2Q7Z6L0 340 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 OR2T33Q8NG76 320 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 OR4C6Q8NH72 309 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 LGALS14Q8TCE9 139 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 PPP1R16AQ96I34 528 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 MCHR1Q99705 422 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 NPAS1Q99742 590 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 BIN3Q9NQY0 253 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 NTNG1Q9Y2I2 539 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 SIPA1L1O43166 1804 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 C13orf42A0A1B0GVH6 325 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TMEM202A6NGA9 273 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 ZNF879B4DU55 563 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 SCN2BO60939 215 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 KRT33AO76009 404 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 LDOC1O95751 146 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 LGI1O95970 557 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 CD22P20273 847 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 PDHA2P29803 388 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 OR12D2P58182 307 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TLE2Q04725 743 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 NDUFA9Q16795 377 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 TSEN54Q7Z6J9 526 aaKnown RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 ADAMTS15Q8TE58 950 aa15.28■□□□□ 0.04
GPC1-201ENST00000264039 ZNF578Q96N58 590 aaPredicted RBP15.28■□□□□ 0.04
GPC1-201ENST00000264039 SHISA3A0PJX4 238 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 RIIAD1A6NNX1 92 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 SGK494L7N484 410 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 VAMP1P23763 118 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 MAPK9P45984 424 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 CEBPGP53567 150 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 FLI1Q01543 452 aaPredicted RBP15.27■□□□□ 0.04
GPC1-201ENST00000264039 KCNC3Q14003 757 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 TMUB2Q71RG4 321 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 FCRLAQ7L513 359 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 LAS2Q8IYD9 372 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 BEST3Q8N1M1 668 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 SLC44A3Q8N4M1 653 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 WDR20Q8TBZ3 569 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 DUSP19Q8WTR2 217 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 SLC6A18Q96N87 628 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 DPH1Q9BZG8 443 aa15.27■□□□□ 0.04
GPC1-201ENST00000264039 DRGXA6NNA5 263 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 SLC38A8A6NNN8 435 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 D6RAR5 112 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 COCHO43405 550 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 FAUP35544 74 aaKnown RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 MNDAP41218 407 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 PFN3P60673 137 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 KCTD9Q7L273 389 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 GPAT4Q86UL3 456 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 CMIPQ8IY22 773 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 OR5M1Q8NGP8 315 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 SMPDL3AQ92484 453 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 S100A16Q96FQ6 103 aaKnown RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 ZNF354BQ96LW1 612 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 ASIC5Q9NY37 505 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 MYEF2Q9P2K5 600 aaKnown RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 MBD1Q9UIS9 605 aaPredicted RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 FAM171A2A8MVW0 826 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 TRIM77I1YAP6 450 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 NFKBIEO00221 500 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 UBXN7O94888 489 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 GTF2F2P13984 249 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 RBMS1P29558 406 aaKnown RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 HCCSP53701 268 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 ETFDHQ16134 617 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 MINDY4Q4G0A6 757 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 Q6ZVU0 165 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 C17orf64Q86WR6 236 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 OR4D9Q8NGE8 314 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 GHSRQ92847 366 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 TCEAL3Q969E4 200 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 LRIG1Q96JA1 1093 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 CMSS1Q9BQ75 279 aaKnown RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 ARHGAP9Q9BRR9 750 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 TCF7L1Q9HCS4 588 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 KRCC1Q9NPI7 259 aaPredicted RBP15.27■□□□□ 0.03
GPC1-201ENST00000264039 PTTG3PQ9NZH4 202 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 TAC3Q9UHF0 121 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.03
GPC1-201ENST00000264039 TRBV2A0A0J9YWF9 115 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 ACOD1A6NK06 481 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 ANKRD34CP0C6C1 535 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 AQP2P41181 271 aa15.26■□□□□ 0.03
GPC1-201ENST00000264039 ST3GAL3Q11203 375 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms