RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 THOC3Q96J01 351 aaKnown RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 CCNL2Q96S94 520 aaPredicted RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 TREX2Q9BQ50 279 aaPredicted RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 CENPVL1A0A0U1RR11 272 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 FRG2CA6NGY1 282 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 C5orf58C9J3I9 102 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 DRD5P21918 477 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 TRHRP34981 398 aaPredicted RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 ESRRGP62508 458 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 RAPSNQ13702 412 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 ZNF630Q2M218 657 aaPredicted RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 ARHGAP11BQ3KRB8 267 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 PTRH1Q86Y79 214 aaKnown RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 PQLC1Q8N2U9 271 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 SPATA9Q9BWV2 254 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 RSPO3Q9BXY4 272 aaPredicted RBP25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 SLC38A1Q9H2H9 487 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 SNX13Q9Y5W8 968 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 V9GYQ6 96 aa25.35■■□□□ 1.65
SMARCD3-201ENST00000262188 OR2J2O76002 312 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 FXNQ16595 210 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 ZFP1Q6P2D0 407 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 SPACA3Q8IXA5 215 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 FLRT3Q9NZU0 649 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 MYOTQ9UBF9 498 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 DOCK10Q96BY6 2186 aa25.34■■□□□ 1.65
SMARCD3-201ENST00000262188 PIGAP37287 484 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 FLOT2Q14254 428 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 REEP3Q6NUK4 255 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 ERICH5Q6P6B1 374 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 VASH1Q7L8A9 365 aaPredicted RBP25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 BHLHE22Q8NFJ8 381 aaPredicted RBP25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 NUBPLQ8TB37 319 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 CDCP1Q9H5V8 836 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 RAXQ9Y2V3 346 aa25.33■■□□□ 1.65
SMARCD3-201ENST00000262188 RBBP4Q09028 425 aa25.33■■□□□ 1.64
SMARCD3-201ENST00000262188 CDC20Q12834 499 aa25.33■■□□□ 1.64
SMARCD3-201ENST00000262188 BNIP2Q12982 314 aa25.33■■□□□ 1.64
SMARCD3-201ENST00000262188 GPR68Q15743 365 aa25.33■■□□□ 1.64
SMARCD3-201ENST00000262188 FRRS1Q6ZNA5 592 aa25.33■■□□□ 1.64
SMARCD3-201ENST00000262188 CHDHQ8NE62 594 aaPredicted RBP25.33■■□□□ 1.64
SMARCD3-201ENST00000262188 A6NL46 340 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 DNAJB5O75953 348 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 NADKO95544 446 aaPredicted RBP25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 SERPINA7P05543 415 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 ABCD3P28288 659 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 SPATS1Q496A3 300 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 ZBED5Q49AG3 693 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 SIGIRRQ6IA17 410 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 TYW3Q6IPR3 259 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 DHFR2Q86XF0 187 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 OR5M3Q8NGP4 307 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 OR8K3Q8NH51 312 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 LILRB4Q8NHJ6 448 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 PSMF1Q92530 271 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 FAM162AQ96A26 154 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 TRNT1Q96Q11 434 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 THUMPD1Q9NXG2 353 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 ANGPT4Q9Y264 503 aa25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 URB1O60287 2271 aaKnown RBP25.32■■□□□ 1.64
SMARCD3-201ENST00000262188 TRIM64BA6NI03 449 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ZNF891A8MT65 544 aaPredicted RBP25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 AGR2O95994 175 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ITGA3P26006 1051 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 CRISP3P54108 245 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 PCBP3P57721 371 aaKnown RBP25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 CYP27C1Q4G0S4 372 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 OR5L2Q8NGL0 311 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 OMA1Q96E52 524 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 IP6K3Q96PC2 410 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ADOQ96SZ5 270 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 DOK1Q99704 481 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 DPH1Q9BZG8 443 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ACTR3BQ9P1U1 418 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 LIPT1Q9Y234 373 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 WDR45Q9Y484 360 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 AP4S1Q9Y587 144 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 PCDHGB3Q9Y5G1 929 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 TRIM64CA6NLI5 447 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ALPPP05187 535 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ICAM2P13598 275 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 DCAF7P61962 342 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 PLCXD2Q0VAA5 305 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 VEZF1Q14119 521 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 DEFB109BQ30KR1 87 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 FAM86B1Q8N7N1 296 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 FAM110BQ8TC76 370 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ADAMTS16Q8TE57 1224 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 TAMM41Q96BW9 452 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 COL21A1Q96P44 957 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ZNF350Q9GZX5 532 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 ZBTB20Q9HC78 741 aaPredicted RBP25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 DKK4Q9UBT3 224 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 MAGEL2Q9UJ55 1249 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 KCNE5Q9UJ90 142 aa25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 FBXO9Q9UK97 447 aaPredicted RBP25.31■■□□□ 1.64
SMARCD3-201ENST00000262188 M0QX08 132 aa25.3■■□□□ 1.64
SMARCD3-201ENST00000262188 ITGA10O75578 1167 aa25.3■■□□□ 1.64
SMARCD3-201ENST00000262188 REM1O75628 298 aa25.3■■□□□ 1.64
SMARCD3-201ENST00000262188 SERPINA1P01009 418 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms