RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 MKL2Q9ULH7 1088 aa16.14■□□□□ 0.17
SRSF1-201ENST00000258962 FAM208BQ5VWN6 2430 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 AGAP5A6NIR3 686 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 MITFO75030 526 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-201ENST00000258962 CLIC3O95833 236 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 DDAH2O95865 285 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ALBP02768 609 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ITGB2P05107 769 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 MYF6P23409 242 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 IGFBP5P24593 272 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 CDC20Q12834 499 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ZNHIT3Q15649 155 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ELAVL1Q15717 326 aaKnown RBP16.13■□□□□ 0.17
SRSF1-201ENST00000258962 GPR68Q15743 365 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 MAPK14Q16539 360 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 RFX4Q33E94 735 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 AP1ARQ63HQ0 302 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 KRT80Q6KB66 452 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ZNF836Q6ZNA1 936 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 USP51Q70EK9 711 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 TSPYL5Q86VY4 417 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-201ENST00000258962 PLPP5Q8NEB5 264 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 OR4N2Q8NGD1 307 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 OR52J3Q8NH60 311 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 SENP5Q96HI0 755 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-201ENST00000258962 UBL7Q96S82 380 aaPredicted RBP16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ITPAQ9BY32 194 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 A4GNTQ9UNA3 340 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 SLC9A8Q9Y2E8 581 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 ORC6Q9Y5N6 252 aa16.13■□□□□ 0.17
SRSF1-201ENST00000258962 NPIPA5A0A0B4J1W7 369 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 NPIPA7E9PJI5 369 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 H0YAE9 185 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 ERVH48-1M5A8F1 160 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 PCDH17O14917 1159 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 SOX30O94993 753 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 GADD45GO95257 159 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 IGKV1D-16P01601 117 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 IGKV3-11P04433 115 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 THBS1P07996 1170 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 ZGLP1P0C6A0 271 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 NPIPA8P0DM63 369 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 CT45A8P0DMV1 189 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 CT45A9P0DMV2 189 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 TRHRP34981 398 aaPredicted RBP16.12■□□□□ 0.17
SRSF1-201ENST00000258962 SLC37A1P57057 533 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 EEF1A1P68104 462 aaKnown RBP16.12■□□□□ 0.17
SRSF1-201ENST00000258962 MYBPC1Q00872 1141 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 NCF4Q15080 339 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 NSDHLQ15738 373 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 CT45A2Q5DJT8 189 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 FAM198BQ6UWH4 519 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 SHISA6Q6ZSJ9 500 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 PEX5LQ8IYB4 626 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 CLIP4Q8N3C7 705 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 SLC2A12Q8TD20 617 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 ZNF721Q8TF20 911 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 GIPC3Q8TF64 312 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 ARHGAP9Q9BRR9 750 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 POLE3Q9NRF9 147 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 TCFL5Q9UL49 500 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 IFT52Q9Y366 437 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 ZFYVE26Q68DK2 2539 aa16.12■□□□□ 0.17
SRSF1-201ENST00000258962 ZFHX4Q86UP3 3567 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 CDC14CA4D256 554 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 CLDN24A6NM45 220 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 PEX12O00623 359 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 FRS3O43559 492 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 CNOT3O75175 753 aaKnown RBP16.11■□□□□ 0.17
SRSF1-201ENST00000258962 GUSBP08236 651 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 PIGAP37287 484 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 RPS18P62269 152 aaKnown RBP16.11■□□□□ 0.17
SRSF1-201ENST00000258962 KCNAB2Q13303 367 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 NNATQ16517 81 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 MICAQ29983 383 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 LANCL3Q6ZV70 420 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 OVCH1Q7RTY7 1134 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 GALNT5Q7Z7M9 940 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 OFCC1Q8IZS5 231 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 C7orf57Q8NEG2 295 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 OR10G2Q8NGC3 310 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 PHF10Q8WUB8 498 aaKnown RBP16.11■□□□□ 0.17
SRSF1-201ENST00000258962 TRIM45Q9H8W5 580 aaPredicted RBP16.11■□□□□ 0.17
SRSF1-201ENST00000258962 NMNAT1Q9HAN9 279 aaPredicted RBP16.11■□□□□ 0.17
SRSF1-201ENST00000258962 C14orf105Q9NVL8 296 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 RLIMQ9NVW2 624 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 FAM118AQ9NWS6 357 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 C3orf18Q9UK00 162 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 CLCA3PQ9Y6N3 262 aa16.11■□□□□ 0.17
SRSF1-201ENST00000258962 TRBV4-1A0A0J9YWV2 114 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 VSTM2BA6NLU5 285 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 TPST2O60704 377 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 DBIP07108 87 aaKnown RBP16.1■□□□□ 0.17
SRSF1-201ENST00000258962 RAD23AP54725 363 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 OCA2Q04671 838 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 TBR1Q16650 682 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 DEFB109BQ30KR1 87 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 COLEC12Q5KU26 742 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 BORAQ6PGQ7 559 aa16.1■□□□□ 0.17
SRSF1-201ENST00000258962 ISLR2Q6UXK2 745 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms