RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 UFSP1Q6NVU6 142 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZSCAN4Q8NAM6 433 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 DENND6BQ8NEG7 585 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR2L2Q8NH16 312 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 PNPT1Q8TCS8 783 aaKnown RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 ARNTL2Q8WYA1 636 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 RPL3LQ92901 407 aaKnown RBP3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 PKNOX2Q96KN3 472 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZNF607Q96SK3 696 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 SENP1Q9P0U3 644 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 SNX6Q9UNH7 406 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 SPACA6W5XKT8 324 aa3.31□□□□□ -1.88
HMGB1P5-201ENST00000255320 KDRP35968 1356 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 A0A1W2PQ72 361 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 MBLAC1A4D2B0 266 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 FRG2CA6NGY1 282 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 SAGE2PA6NJ88 616 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 EFCAB7A8K855 629 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 GMFGO60234 142 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 F10P00742 488 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 IGHDP01880 384 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 UGT2B4P06133 528 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 IL2RGP31785 369 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 PPT1P50897 306 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 PLA2G16P53816 162 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 NTHL1P78549 312 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 RGS1Q08116 209 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 HIGD2BQ4VC39 106 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 DCST2Q5T1A1 773 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 ATAD3BQ5T9A4 648 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 RNLSQ5VYX0 342 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 TTC23Q5W5X9 447 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 SCYL2Q6P3W7 929 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 KIAA1328Q86T90 577 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 MYPOPQ86VE0 399 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 SERINC5Q86VE9 423 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 STEAP2Q8NFT2 490 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR9A4Q8NGU2 314 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 CNIH3Q8TBE1 160 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 AGAP11Q8TF27 550 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 GTSF1Q8WW33 167 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 SLC5A11Q8WWX8 675 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 SDSLQ96GA7 329 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 TMEM80Q96HE8 168 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 PPP1R16AQ96I34 528 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 TTC25Q96NG3 672 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 FOXN4Q96NZ1 517 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 APOL2Q9BQE5 337 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 UBXN6Q9BZV1 441 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 ELOVL3Q9HB03 270 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 TBK1Q9UHD2 729 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 CRLS1Q9UJA2 301 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR10H1Q9Y4A9 318 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 MAB21L2Q9Y586 359 aa3.3□□□□□ -1.88
HMGB1P5-201ENST00000255320 COL5A2P05997 1499 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 USP6P35125 1406 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 IGHV3-35A0A0C4DH35 117 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 CDX4O14627 284 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 MAGEB3O15480 346 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 CD55P08174 381 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 HBQ1P09105 142 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 IGHV1-2P23083 117 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 ATP5A1P25705 553 aaKnown RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 GBX2P52951 348 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 CXCL6P80162 114 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 CBX1P83916 185 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 BDH1Q02338 343 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 ZNF154Q13106 437 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 GPM6BQ13491 265 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 TGIF1Q15583 401 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 TPD52L1Q16890 204 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 TATDN3Q17R31 274 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 SLC5A12Q1EHB4 618 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 TIGITQ495A1 244 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 CCDC152Q4G0S7 254 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 MEDAGQ5VYS4 303 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 BLOC1S2Q6QNY1 142 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 LRRC70Q7Z2Q7 622 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 C9orf40Q8IXQ3 194 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 GPR65Q8IYL9 337 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 LRRC43Q8N309 656 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 OR2T33Q8NG76 320 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 MYLPFQ96A32 169 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 SENP8Q96LD8 212 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 RIT2Q99578 217 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 DUSP16Q9BY84 665 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 PNNQ9H307 717 aaKnown RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 CUTCQ9NTM9 273 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 SMPD3Q9NY59 655 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 GNG12Q9UBI6 72 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 MRPS33Q9Y291 106 aaKnown RBP3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 L3MBTL1Q9Y468 752 aa3.29□□□□□ -1.88
HMGB1P5-201ENST00000255320 A8MX80 341 aa3.28□□□□□ -1.88
HMGB1P5-201ENST00000255320 GPR89AB7ZAQ6 455 aa3.28□□□□□ -1.88
HMGB1P5-201ENST00000255320 BTN3A3O00478 584 aa3.28□□□□□ -1.88
HMGB1P5-201ENST00000255320 BCL2L11O43521 198 aa3.28□□□□□ -1.88
HMGB1P5-201ENST00000255320 GPRIN2O60269 458 aa3.28□□□□□ -1.88
HMGB1P5-201ENST00000255320 KIAA0754O94854 1291 aa3.28□□□□□ -1.88
HMGB1P5-201ENST00000255320 H2AFZP0C0S5 128 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms