RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF850A8MQ14 1090 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 RP2O75695 350 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 ZFAND5O76080 213 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 ZNF806P0C7X5 589 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 MAGEA12P43365 314 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 PLAG1Q6DJT9 500 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 GTF2H4Q92759 462 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 UBQLN4Q9NRR5 601 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 FAM86C1Q9NVL1 165 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 CUEDC1Q9NWM3 386 aaPredicted RBP17.84■□□□□ 0.45
PTPRE-201ENST00000254667 KCNIP1Q9NZI2 227 aa17.84■□□□□ 0.45
PTPRE-201ENST00000254667 RAB38P57729 211 aa17.83■□□□□ 0.45
PTPRE-201ENST00000254667 SEMA3BQ13214 749 aa17.83■□□□□ 0.45
PTPRE-201ENST00000254667 ATAD3CQ5T2N8 411 aa17.83■□□□□ 0.45
PTPRE-201ENST00000254667 GALNT6Q8NCL4 622 aa17.83■□□□□ 0.45
PTPRE-201ENST00000254667 FBXO27Q8NI29 283 aa17.83■□□□□ 0.45
PTPRE-201ENST00000254667 RBM24Q9BX46 236 aaKnown RBP17.83■□□□□ 0.45
PTPRE-201ENST00000254667 IER3IP1Q9Y5U9 82 aa17.83■□□□□ 0.45
PTPRE-201ENST00000254667 PPP6CO00743 305 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 GJB3O75712 270 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 ITGAMP11215 1152 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 MMP12P39900 470 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 EIF2B1Q14232 305 aaKnown RBP17.83■□□□□ 0.44
PTPRE-201ENST00000254667 WBP2NLQ6ICG8 309 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 TMEM151AQ8N4L1 468 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 BPIFA2Q96DR5 249 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 CUTCQ9NTM9 273 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 MCTS1Q9ULC4 181 aaKnown RBP17.83■□□□□ 0.44
PTPRE-201ENST00000254667 EFCAB7A8K855 629 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 AQP9O43315 295 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 SRYQ05066 204 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 ECH1Q13011 328 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 TBRG1Q3YBR2 411 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 TMEM52BQ4KMG9 183 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 CCSAPQ6IQ19 270 aaPredicted RBP17.83■□□□□ 0.44
PTPRE-201ENST00000254667 ARSKQ6UWY0 536 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 ABHD12BQ7Z5M8 362 aaPredicted RBP17.83■□□□□ 0.44
PTPRE-201ENST00000254667 SYT14Q8NB59 555 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 CLEC1AQ8NC01 280 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 SULT2B1O00204 365 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 PSMB5P28074 263 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 DEFA5Q01523 94 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 SLC22A10Q63ZE4 541 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 OPN5Q6U736 354 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 NLGN4XQ8N0W4 816 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF417Q8TAU3 575 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 INIPQ9NRY2 104 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 C14orf119Q9NWQ9 140 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 PARPBPQ9NWS1 579 aa17.83■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF443Q9Y2A4 671 aaPredicted RBP17.83■□□□□ 0.44
PTPRE-201ENST00000254667 PLCH1Q4KWH8 1693 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 SMAD9O15198 467 aaKnown RBP17.82■□□□□ 0.44
PTPRE-201ENST00000254667 IGHEP01854 428 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 FGL1Q08830 312 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 NTRK2Q16620 822 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 PRR22Q8IZ63 422 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 RLN3Q8WXF3 142 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 TESQ9UGI8 421 aaKnown RBP17.82■□□□□ 0.44
PTPRE-201ENST00000254667 LINC01553A4QN01 128 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 ATG12O94817 140 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 KLKB1P03952 638 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 SFTPDP35247 375 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 NFATC3Q12968 1075 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 LPAL2Q16609 132 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 PLPP6Q8IY26 295 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 GDPD1Q8N9F7 314 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 GPR148Q8TDV2 347 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 NELFAQ9H3P2 528 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 INPP5EQ9NRR6 644 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 KLHL9Q9P2J3 617 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 IL20RAQ9UHF4 553 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 ZNF337Q9Y3M9 751 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 L3MBTL4Q8NA19 623 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 OR14A16Q8NHC5 309 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 STOML3Q8TAV4 291 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 FOLH1BQ9HBA9 442 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 KCNN3Q9UGI6 736 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 CCL26Q9Y258 94 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 H0YGG7 62 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 H3BML4 177 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 YKT6O15498 198 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 PVRP15151 417 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 LHCGRP22888 699 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 ARF3P61204 181 aaPredicted RBP17.82■□□□□ 0.44
PTPRE-201ENST00000254667 MAP4K2Q12851 820 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 AWAT2Q6E213 333 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 OR8J2Q8NGG1 315 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 COQ8AQ8NI60 647 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 SCGB1C1Q8TD33 95 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 MRPL38Q96DV4 380 aaKnown RBP17.82■□□□□ 0.44
PTPRE-201ENST00000254667 MACROD1Q9BQ69 325 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 RTP3Q9BQQ7 232 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 CNOT2Q9NZN8 540 aaKnown RBP17.82■□□□□ 0.44
PTPRE-201ENST00000254667 FBXL3Q9UKT7 428 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 ASB4Q9Y574 426 aa17.82■□□□□ 0.44
PTPRE-201ENST00000254667 hCG_1807616A0A1W2PRN6 198 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 H3BNC9 293 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 CREBL2O60519 120 aaPredicted RBP17.81■□□□□ 0.44
PTPRE-201ENST00000254667 ARAFP10398 606 aa17.81■□□□□ 0.44
PTPRE-201ENST00000254667 IMPA1P29218 277 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms