RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 PGBD2Q6P3X8 592 aa21.97■■□□□ 1.11
RRP9-201ENST00000232888 OR4K5Q8NGD3 323 aa21.97■■□□□ 1.11
RRP9-201ENST00000232888 HSPBAP1Q96EW2 488 aa21.97■■□□□ 1.11
RRP9-201ENST00000232888 ZNF559Q9BR84 538 aa21.97■■□□□ 1.11
RRP9-201ENST00000232888 ZPBPQ9BS86 351 aa21.97■■□□□ 1.11
RRP9-201ENST00000232888 C19orf25Q9UFG5 118 aaPredicted RBP21.97■■□□□ 1.11
RRP9-201ENST00000232888 GPN3Q9UHW5 284 aaPredicted RBP21.97■■□□□ 1.11
RRP9-201ENST00000232888 TRAPPC13A5PLN9 417 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 SAGE2PA6NJ88 616 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 CPSF4LA6NMK7 179 aaKnown RBP21.96■■□□□ 1.11
RRP9-201ENST00000232888 RFPL3O75679 317 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 CYP4B1P13584 511 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 GPR143P51810 404 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 CD47Q08722 323 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 C1orf94Q6P1W5 598 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 LANCL3Q6ZV70 420 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 ZNF550Q7Z398 422 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 ZNF527Q8NB42 609 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 GTPBP3Q969Y2 492 aaKnown RBP21.96■■□□□ 1.11
RRP9-201ENST00000232888 SLC41A3Q96GZ6 507 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 SPSB2Q99619 263 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 PRRX2Q99811 253 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 SEMA4CQ9C0C4 833 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 NXF5Q9H1B4 397 aaKnown RBP21.96■■□□□ 1.11
RRP9-201ENST00000232888 UBQLN4Q9NRR5 601 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 SEMA4GQ9NTN9 838 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 BLOC1S6Q9UL45 172 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 PCDHGA1Q9Y5H4 931 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 FER1L5A0AVI2 2057 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 NINQ8N4C6 2090 aa21.96■■□□□ 1.11
RRP9-201ENST00000232888 ASCC3Q8N3C0 2202 aaKnown RBP21.96■■□□□ 1.11
RRP9-201ENST00000232888 A0A087WXM4 84 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 SMNDC1O75940 238 aaKnown RBP eCLIP21.95■■□□□ 1.11
RRP9-201ENST00000232888 OSMP13725 252 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 GSTM3P21266 225 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 SLC5A2P31639 672 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 GGT2P36268 569 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 ADH7P40394 386 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 CSRP2Q16527 193 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 C6orf141Q5SZD1 244 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 KLHL17Q6TDP4 642 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 TMEM205Q6UW68 189 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 C9orf40Q8IXQ3 194 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 ZNF440Q8IYI8 595 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 B3GNT7Q8NFL0 401 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 ACOT11Q8WXI4 607 aaPredicted RBP21.95■■□□□ 1.11
RRP9-201ENST00000232888 TP53INP1Q96A56 240 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 WWTR1Q9GZV5 400 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 SLC35A3Q9Y2D2 325 aa21.95■■□□□ 1.11
RRP9-201ENST00000232888 MUC3AQ02505 3323 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 CD63P08962 238 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 RPL5P46777 297 aaKnown RBP21.95■■□□□ 1.1
RRP9-201ENST00000232888 CXCR4P61073 352 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 IL5RAQ01344 420 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 ALDH6A1Q02252 535 aaKnown RBP21.95■■□□□ 1.1
RRP9-201ENST00000232888 TARDBPQ13148 414 aaKnown RBP eCLIP21.95■■□□□ 1.1
RRP9-201ENST00000232888 NNATQ16517 81 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 KLHL26Q53HC5 615 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 DCAF12Q5T6F0 453 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 ZNF613Q6PF04 617 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 SHISA6Q6ZSJ9 500 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 RRM2BQ7LG56 351 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 GDF7Q7Z4P5 450 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 DEPDC4Q8N2C3 294 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 CRB3Q9BUF7 120 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 ULBP3Q9BZM4 244 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 TMEM27Q9HBJ8 222 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 USP34Q70CQ2 3546 aa21.95■■□□□ 1.1
RRP9-201ENST00000232888 A0A087WUU8 490 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 DPPA5A6NC42 116 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 SERINC4A6NH21 518 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 TRIM64CA6NLI5 447 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 C9J4A7 227 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 POU2F1P14859 743 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 CRISP1P54107 249 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 SPEM2Q0P670 501 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 CDCP2Q5VXM1 449 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 ZNF730Q6ZMV8 503 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 ZNF517Q6ZMY9 492 aaPredicted RBP21.94■■□□□ 1.1
RRP9-201ENST00000232888 CPEB2Q7Z5Q1 589 aaKnown RBP21.94■■□□□ 1.1
RRP9-201ENST00000232888 ZNF441Q8N8Z8 693 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 NFAM1Q8NET5 270 aaPredicted RBP21.94■■□□□ 1.1
RRP9-201ENST00000232888 GNPDA2Q8TDQ7 276 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 ZNF566Q969W8 418 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 PRR14Q9BWN1 585 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 TRIM2Q9C040 744 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 KRCC1Q9NPI7 259 aaPredicted RBP21.94■■□□□ 1.1
RRP9-201ENST00000232888 DNAJB12Q9NXW2 375 aaKnown RBP21.94■■□□□ 1.1
RRP9-201ENST00000232888 LOXL2Q9Y4K0 774 aa21.94■■□□□ 1.1
RRP9-201ENST00000232888 CCDC159P0C7I6 412 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 ZNF28P17035 718 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 EPHA2P29317 976 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 KRT20P35900 424 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 HLCSP50747 726 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 NR1H2P55055 460 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 CSNK2BP67870 215 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 HOXC5Q00444 222 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 TEKQ02763 1124 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 CDK5R2Q13319 367 aa21.93■■□□□ 1.1
RRP9-201ENST00000232888 OR1Q1Q15612 314 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms