RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gm15085Q62012 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Nox3Q672J9 568 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Elfn2Q68FM6 823 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 DraxinQ6PAL1 343 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cd300ld3Q6SJQ5 245 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cpeb4Q7TN98 729 aaKnown RBP11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Samd4bQ80XS6 687 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Nabp1Q8BGW5 198 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Dusp28Q8BTR5 163 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Klhl31Q8BWA5 634 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Atg16l1Q8C0J2 607 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Prps1l1Q8C5R8 318 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Slco4a1Q8K078 723 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zfp991Q8R1N3 573 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Oard1Q8R5F3 152 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn1r69Q8VIC1 319 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Lrrc49Q91YK0 686 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cdk9Q99J95 372 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Mrpl24Q9CQ06 216 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Riox1Q9JJF3 603 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Clic1Q9Z1Q5 241 aaKnown RBP11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Dennd4cA6H8H2 1906 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Sdk1Q3UH53 2193 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 2410004P03RikA0A087WQY2 205 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Samt3A2ARK7 233 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zfp735B1ARH2 734 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn2r120E9PX34 856 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm5861F6VCN9 180 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zfp870J3QMA4 560 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Lhx8O35652 367 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 SftpcP21841 193 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Ptpn6P29351 595 aaKnown RBP11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 TtkP35761 856 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Ctf2P83714 204 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Mrgprb2Q3KNA1 338 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Brf2Q3UAW9 420 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Pate2Q3UW31 111 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tmed1Q3V009 227 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Krtcap2Q5RL79 136 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tle1Q62440 770 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Rnf38Q8BI21 518 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Fam120cQ8C3F2 1091 aaKnown RBP11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Map2k7Q8CE90 535 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Hist1h2aaQ8CGP4 129 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Noxa1Q8CJ00 444 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Hmgcs1Q8JZK9 520 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Pom121Q8K3Z9 1200 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Lrg1Q91XL1 342 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cd209eQ91ZW7 208 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Park7Q99LX0 189 aaKnown RBP11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Fam96aQ9DCL2 160 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Raet1dQ9JI58 249 aa11.09□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm9195A0A140LHT4 2805 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Gm11565A2A4M7 156 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Ccdc120A2AEV7 629 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Olfr1306A2BFL7 312 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Macc1E9PXX8 851 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Gm6465F7A7Y6 181 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Gm10324L7N208 604 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Vmn2r57L7N269 863 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Gm8897L7N294 181 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Cyp2j5O54749 501 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 BckdkO55028 412 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Sh3pxd2aO89032 1124 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 HbaP01942 142 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Lire1P11260 357 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Hoxa10P31310 416 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Gpx3P46412 226 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 St8sia5P70126 412 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Col10a1Q05306 680 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Olfr629Q0VBH3 314 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Wfdc5Q4KXB6 126 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Kctd8Q50H33 476 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Dhrs9Q58NB6 319 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Elavl2Q60899 360 aaKnown RBP11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Eif2dQ61211 570 aaKnown RBP11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 EngQ63961 653 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 SordQ64442 357 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Cyb561a3Q6P1H1 242 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 RgmaQ6PCX7 454 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Tlr12Q6QNU9 906 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Tas2r131Q7M708 310 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Sel1l3Q80TS8 1137 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Csgalnact1Q8BJQ9 530 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Peli2Q8BST6 419 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Cxcl16Q8BSU2 246 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Cpne3Q8BT60 533 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Lrfn5Q8BXA0 719 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Vmn1r28Q8R2C9 302 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Grpel1Q99LP6 217 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Haus5Q9D786 619 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Erp27Q9D8U3 272 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 TcimQ9D915 106 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Slc25a18Q9DB41 320 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 GhrlQ9EQX0 117 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Capn7Q9R1S8 813 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Wif1Q9WUA1 379 aa11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 VapaQ9WV55 249 aaKnown RBP11.08□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 LrbaQ9ESE1 2856 aa11.07□□□□□ -0.64
Ccdc28a-202ENSMUST00000080860 Gm45140A0A0N4SUM8 220 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms