RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Atp6v1c2Q99L60 427 aa6.46□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tada1Q99LM9 335 aa6.46□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zswim1Q9CWV7 455 aaKnown RBP6.46□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Kat8Q9D1P2 458 aa6.46□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tas2r119Q9JKT2 335 aa6.46□□□□□ -1.38
Bdnf-201ENSMUST00000053317 ChmlQ9QZD5 621 aa6.46□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Arfgef3Q3UGY8 2170 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm21497A0A087WRK3 222 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 A0A1Y7VIU7 259 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm7929A0A286YDV3 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm21977F6U3N7 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8247F6VRJ8 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8005F6YKY3 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm3015F6ZAP6 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8212F6ZMY5 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm7954F7BAX1 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8138F7BY56 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8232F7CFJ3 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm17079F7D8Y4 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8094K7N6U8 211 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn2r31L7N1Z4 861 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8165L7N218 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm8122L7N2C7 213 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm17078M0QW51 211 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 H2-Q1O19441 368 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Npc1O35604 1277 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tp63O88898 680 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Klk1b11P15946 261 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zp2P20239 713 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Apex1P28352 317 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Kcnab2P62482 367 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Hpcal1P62748 193 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pcbp2Q61990 362 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 RgnQ64374 299 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 GnptgQ6S5C2 307 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Olfr299Q7TS05 330 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ugt2a1Q80X89 528 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc25a40Q8BGP6 337 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Bbs4Q8C1Z7 520 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Stbd1Q8C7E7 338 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Colec10Q8CF98 277 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rcor1Q8CFE3 480 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 FRRS1Q8K385 592 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ogfrl1Q8VE52 464 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Pex16Q91XC9 336 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 PclafQ9CQX4 110 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 MINDY3Q9CV28 444 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tmbim6Q9D2C7 237 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ing5Q9D8Y8 240 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Spaca1Q9DA48 305 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 TesclQ9DAJ7 231 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Fam208bQ5DTT3 2382 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm5678A0A1B0GRG8 277 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Crisp4E9PVG4 293 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm9493F6SVV1 192 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm21976J3QNN2 249 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Vmn2r9K7N6Z8 848 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm5724L7N264 670 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Gm3033M0QWI0 180 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cers1P27545 350 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 HexaP29416 528 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc1a5P51912 553 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rsrp1Q3UC65 298 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cnpy1Q4VAB4 94 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zfp78Q5U406 512 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc5a6Q5U4D8 634 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Capn3Q64691 821 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 IfneQ80ZF2 192 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Nipal3Q8BGN5 410 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dnajc22Q8CHS2 339 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Acsm2Q8K0L3 575 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mrpl15Q9CPR5 295 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zfp84Q9D654 559 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Dnase1l1Q9D7J6 314 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tbc1d20Q9D9I4 402 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Sema4gQ9WUH7 837 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Clic1Q9Z1Q5 241 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Zfp873A0A1B0GT64 667 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Slc25a54B1AUS6 473 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Catsperg1E9Q355 1151 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rnpepl1G5E872 720 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 CaskO70589 926 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 P01668 110 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mup3P04939 184 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mcpt1P11034 246 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Hsd11b2P51661 386 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ap2s1P62743 142 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Rps26P62855 115 aaKnown RBP6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Kcnj8P97794 424 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cpa6Q5U901 438 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Trim69Q80X56 500 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Acot4Q8BWN8 421 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Mettl7a1Q8C6B0 244 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Ifnl3Q8CGK6 193 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 RtbdnQ8QZY4 247 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Znf768Q8R0T2 568 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Cdkal1Q91WE6 578 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 RabifQ91X96 123 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Lnx2Q91XL2 687 aa6.45□□□□□ -1.38
Bdnf-201ENSMUST00000053317 Tpra1Q99MU1 369 aa6.45□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms