RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Nthl1O35980 300 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Ulk1O70405 1051 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Mtnd3P03899 115 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 GzmdP11033 252 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gstm5P48774 224 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gjb5Q02739 271 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 CkbQ04447 381 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Taar8aQ5QD07 344 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Mab21l2Q8BPP1 359 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gpr26Q8BZA7 337 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Olfr1353Q8VGU8 309 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 4931417E11RikQ9CR05 305 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 FtmtQ9D5H4 237 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Spaca1Q9DA48 305 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Glipr1l1Q9DAG6 236 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Copz2Q9JHH9 205 aa13.92□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 IghdA0A0A6YW14 291 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Igkv5-39A0A0G2JDV4 115 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gm5141A0A0J9YUW3 581 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Cd163l1A0A1B0GSB0 991 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 CerklA2AQH1 525 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Slco5a1E9PVD9 850 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gm8906L7N2A2 181 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 BckdkO55028 412 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Slc9a3r1P70441 355 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Kdm4dQ3U2K5 510 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Itgb2lQ3UV74 738 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Slc35g3Q5F297 340 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Szrd1Q6NXN1 152 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 IppkQ6P1C1 489 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Znf182Q6P560 627 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Tas2r104Q7M723 302 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 MylipQ8BM54 445 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 TtpaQ8BWP5 278 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Phtf2Q8CB19 747 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Hpf1Q8CFE2 346 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Piwil4Q8CGT6 848 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Vmn1r32Q8R2D9 302 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Kiss1rQ91V45 396 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Clp1Q99LI9 425 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Med30Q9CQI9 178 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Uqcrc1Q9CZ13 480 aaKnown RBP13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 FopnlQ9CZS3 174 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Ccdc3Q9D6Y1 273 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Med27Q9DB40 311 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Map2k5Q9WVS7 448 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 NcdnQ9Z0E0 729 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 L3mbtl4B1B1A0 621 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Vmn2r115E9Q0E7 857 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gm20715E9Q3L7 95 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Zfp994J3QM38 661 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Rasd1O35626 280 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Itm2bO89051 266 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 CfbP04186 761 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Ceacam1P31809 521 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gpr3P35413 330 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Cdh4P39038 913 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 P58686 83 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Gm14226Q3TZL0 686 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Nr2f1Q60632 422 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 GnptgQ6S5C2 307 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Kcnk12Q76M80 430 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Carnmt1Q80UY1 400 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Kcmf1Q80UY2 381 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Cox15Q8BJ03 413 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Efemp1Q8BPB5 493 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 PpcdcQ8BZB2 204 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Olfr61Q8VGM2 311 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Vmn1r71Q8VIC0 307 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Ceacam2Q925P2 520 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Spef1Q99JL1 234 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 CenpnQ9CZW2 337 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Dmac2Q9D7K5 258 aaKnown RBP13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Pmepa1Q9D7R2 260 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Cdrt4Q9DA64 179 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Scamp4Q9JKV5 230 aa13.91□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Prr36E9PV26 1098 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Zfp169E9Q3R6 731 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Ms4a18J3QN01 344 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Olfr209L7N1X3 305 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Rnf13O54965 381 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 P01878 344 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Hoxb6P09023 224 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Egfbp2P36368 261 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Cdh11P55288 796 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Mrpl10Q3TBW2 262 aaKnown RBP13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Traf4Q61382 470 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Znf354aQ61751 572 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Arhgef39Q66JY6 344 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Zfp82Q6P9Y7 530 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Znf784Q8BI69 297 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Fam69cQ8BQT2 410 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Plekhs1Q8BW88 474 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Trmt10aQ8C1Z8 328 aaKnown RBP13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Yipf4Q8C407 246 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 4921517D22RikQ8CET0 269 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Adam4Q8CGQ2 763 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Eml3Q8VC03 897 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Olfr99Q8VFE4 305 aa13.9□□□□□ -0.18
Ushbp1-201ENSMUST00000049184 Cdhr1Q8VHP6 859 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms