RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Rpl10Q6ZWV3 214 aaKnown RBP9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cox15Q8BJ03 413 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tmed4Q8R1V4 227 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr1461Q8VEV7 312 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Olfr811Q8VFI1 319 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 NtpcrQ9CQA9 190 aaKnown RBP9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 EqtnQ9D9V2 337 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Tceal6Q9DB24 200 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Alg2Q9DBE8 415 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Alyref2Q9JJW6 218 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Nme7Q9QXL8 395 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 ArntlQ9WTL8 632 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cdc7Q9Z0H0 564 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Cacna1bO55017 2327 aa9.4□□□□□ -0.9
Ldlr-201ENSMUST00000034713 Igkv5-45A0A0B4J1J1 115 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Xpnpep2B1AVD1 674 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm9008E9PVG0 424 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn2r96E9PZU5 664 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Coq10aE9Q3H6 259 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Entpd2O55026 495 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 F2rl3O88634 396 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cst3P21460 140 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cd38P56528 304 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Adamts8P57110 905 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 ActbP60710 375 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Actg1P63260 375 aaKnown RBP9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Scgb1a1Q06318 96 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Klhl21Q3U410 597 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ugt2b36Q3UEP4 530 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Fam71f1Q3UZD7 341 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Mep1bQ61847 704 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 DbhQ64237 622 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Chst9Q76EC5 413 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr1161Q7TR29 321 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Enpp6Q8BGN3 440 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Spata2lQ8BNN1 426 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lancl3Q8CD19 420 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gramd1cQ8CI52 457 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 CenpiQ8K1K4 746 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zmynd11Q8R5C8 602 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ffar2Q8VCK6 330 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rab28Q99KL7 221 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Fam69bQ99ML4 431 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cdc40Q9DC48 579 aaKnown RBP9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ssna1Q9JJ94 119 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 ProdhQ9WU79 599 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Slc7a5Q9Z127 512 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Mrap2D3Z1Q2 207 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm21560D3Z7A4 205 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn2r12L7N217 831 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Il6P08505 211 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ggta1P23336 394 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Htr7P32304 448 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 P58686 83 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 St3gal3P97325 374 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Prtn3Q61096 254 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 CpmQ80V42 443 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zfp790Q80ZX2 779 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 GalpQ810H5 117 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ptbp3Q8BHD7 523 aaKnown RBP9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 LdahQ8BVA5 326 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Arrb1Q8BWG8 418 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Tmem163Q8C996 288 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rasgef1bQ8JZL7 473 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Vmn1r30Q8R2D2 302 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Wdr74Q8VCG3 384 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Zfyve21Q8VCM3 234 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ocel1Q8VCR9 219 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Oas1hQ8VI97 369 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 SharpinQ91WA6 380 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ier5lQ99J55 406 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Spaca1Q9DA48 305 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 TsnaxQ9QZE7 290 aaKnown RBP9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm5493S4R2D1 92 aa9.4□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Kat6aQ8BZ21 2003 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 RttnQ8R4Y8 2226 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Igkv5-43A0A0B4J1J2 115 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ggta1l1A2AUQ7 319 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gabrr3B2RXA8 464 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Ceacam3E9Q6J4 706 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gm19965J3QNY8 723 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dok2O70469 412 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Chrm4P32211 479 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 GnrhrQ01776 327 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Timm8a2Q4FZG7 97 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 4930438A08RikQ5SPH3 536 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Dsg1cQ7TSF0 911 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cox14Q8BH51 57 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Prr11Q8BHE0 368 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Gpr20Q8BYC4 358 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Rnf222Q8CEF8 211 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Nmral1Q8K2T1 309 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Cys1Q8R4T1 145 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Lipt1Q8VCM4 373 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr109Q8VG96 314 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Olfr380Q8VGT3 311 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Pbx4Q99NE9 378 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Steap1Q9CWR7 339 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 Asb12Q9D738 308 aa9.39□□□□□ -0.91
Ldlr-201ENSMUST00000034713 PrepQ9QUR6 710 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms