RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 SLC4A9Q96Q91 983 aa13.22□□□□□ -0.29
CASC19-247ENST00000641642 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
CASC19-247ENST00000641642 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
CASC19-247ENST00000641642 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
CASC19-247ENST00000641642 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
CASC19-247ENST00000641642 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
CASC19-247ENST00000641642 CYP19A1P11511 503 aaPredicted RBP13.21□□□□□ -0.29
CASC19-247ENST00000641642 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
CASC19-247ENST00000641642 DNAJC10Q8IXB1 793 aa13.21□□□□□ -0.29
CASC19-247ENST00000641642 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
CASC19-247ENST00000641642 ARHGAP45Q92619 1136 aa13.21□□□□□ -0.29
CASC19-247ENST00000641642 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
CASC19-247ENST00000641642 C5P01031 1676 aa13.21□□□□□ -0.3
CASC19-247ENST00000641642 TJP1Q07157 1748 aa13.2□□□□□ -0.3
CASC19-247ENST00000641642 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
CASC19-247ENST00000641642 PDE4AP27815 886 aa13.2□□□□□ -0.3
CASC19-247ENST00000641642 TXNRD1Q16881 649 aa13.2□□□□□ -0.3
CASC19-247ENST00000641642 SSH1Q8WYL5 1049 aa13.2□□□□□ -0.3
CASC19-247ENST00000641642 SMC4Q9NTJ3 1288 aa13.2□□□□□ -0.3
CASC19-247ENST00000641642 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
CASC19-247ENST00000641642 PTPRCP08575 1304 aa13.19□□□□□ -0.3
CASC19-247ENST00000641642 TAF1LQ8IZX4 1826 aa13.19□□□□□ -0.3
CASC19-247ENST00000641642 MS4A1P11836 297 aa13.19□□□□□ -0.3
CASC19-247ENST00000641642 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
CASC19-247ENST00000641642 ITPK1Q13572 414 aa13.19□□□□□ -0.3
CASC19-247ENST00000641642 NPM2Q86SE8 214 aaKnown RBP13.19□□□□□ -0.3
CASC19-247ENST00000641642 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
CASC19-247ENST00000641642 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
CASC19-247ENST00000641642 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
CASC19-247ENST00000641642 EP400Q96L91 3159 aa13.18□□□□□ -0.3
CASC19-247ENST00000641642 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
CASC19-247ENST00000641642 PDIA6Q15084 440 aa13.18□□□□□ -0.3
CASC19-247ENST00000641642 CAMKK2Q96RR4 588 aa13.18□□□□□ -0.3
CASC19-247ENST00000641642 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
CASC19-247ENST00000641642 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
CASC19-247ENST00000641642 A0A087WZG4 1122 aa13.17□□□□□ -0.3
CASC19-247ENST00000641642 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
CASC19-247ENST00000641642 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
CASC19-247ENST00000641642 FOSBP53539 338 aa13.17□□□□□ -0.3
CASC19-247ENST00000641642 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
CASC19-247ENST00000641642 RREB1Q92766 1687 aa13.17□□□□□ -0.3
CASC19-247ENST00000641642 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
CASC19-247ENST00000641642 A1BGP04217 495 aa13.16□□□□□ -0.3
CASC19-247ENST00000641642 MFSD10Q14728 455 aa13.16□□□□□ -0.3
CASC19-247ENST00000641642 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
CASC19-247ENST00000641642 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
CASC19-247ENST00000641642 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
CASC19-247ENST00000641642 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
CASC19-247ENST00000641642 LRRC4BQ9NT99 713 aa13.16□□□□□ -0.3
CASC19-247ENST00000641642 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
CASC19-247ENST00000641642 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 BCAR3O75815 825 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
CASC19-247ENST00000641642 FLIIQ13045 1269 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 ZKSCAN2Q63HK3 967 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
CASC19-247ENST00000641642 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 ZNF454Q8N9F8 522 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 VPS9D1Q9Y2B5 631 aa13.15□□□□□ -0.3
CASC19-247ENST00000641642 C4BP0C0L5 1744 aa13.14□□□□□ -0.31
CASC19-247ENST00000641642 EN1Q05925 392 aaPredicted RBP13.14□□□□□ -0.31
CASC19-247ENST00000641642 PDE3AQ14432 1141 aa13.14□□□□□ -0.31
CASC19-247ENST00000641642 ATF7IPQ6VMQ6 1270 aa13.14□□□□□ -0.31
CASC19-247ENST00000641642 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
CASC19-247ENST00000641642 AK7Q96M32 723 aa13.14□□□□□ -0.31
CASC19-247ENST00000641642 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
CASC19-247ENST00000641642 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
CASC19-247ENST00000641642 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
CASC19-247ENST00000641642 SSFA2P28290 1259 aa13.13□□□□□ -0.31
CASC19-247ENST00000641642 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
CASC19-247ENST00000641642 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
CASC19-247ENST00000641642 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
CASC19-247ENST00000641642 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
CASC19-247ENST00000641642 IBTKQ9P2D0 1353 aaPredicted RBP13.12□□□□□ -0.31
CASC19-247ENST00000641642 MYL6BP14649 208 aa13.12□□□□□ -0.31
CASC19-247ENST00000641642 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
CASC19-247ENST00000641642 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
CASC19-247ENST00000641642 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
CASC19-247ENST00000641642 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
CASC19-247ENST00000641642 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
CASC19-247ENST00000641642 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
CASC19-247ENST00000641642 COPS6Q7L5N1 327 aa13.12□□□□□ -0.31
CASC19-247ENST00000641642 PLBD2Q8NHP8 589 aa13.12□□□□□ -0.31
CASC19-247ENST00000641642 TCERG1O14776 1098 aaKnown RBP13.11□□□□□ -0.31
CASC19-247ENST00000641642 GNPATO15228 680 aa13.11□□□□□ -0.31
CASC19-247ENST00000641642 HSP90AB3PQ58FF7 597 aa13.11□□□□□ -0.31
CASC19-247ENST00000641642 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
CASC19-247ENST00000641642 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
CASC19-247ENST00000641642 XAGE3Q8WTP9 111 aa13.11□□□□□ -0.31
CASC19-247ENST00000641642 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
CASC19-247ENST00000641642 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
CASC19-247ENST00000641642 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
CASC19-247ENST00000641642 COL15A1P39059 1388 aa13.1□□□□□ -0.31
CASC19-247ENST00000641642 KCNQ4P56696 695 aa13.1□□□□□ -0.31
CASC19-247ENST00000641642 G2E3Q7L622 706 aa13.1□□□□□ -0.31
CASC19-247ENST00000641642 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms