RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 IBTKQ9P2D0 1353 aaPredicted RBP17.98■□□□□ 0.47
RTTN-221ENST00000640736 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
RTTN-221ENST00000640736 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
RTTN-221ENST00000640736 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
RTTN-221ENST00000640736 LTBP3Q9NS15 1303 aa17.97■□□□□ 0.47
RTTN-221ENST00000640736 GLTPD2A6NH11 291 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 NTSR2O95665 410 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 ALDH1B1P30837 517 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 CCDC93Q567U6 631 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
RTTN-221ENST00000640736 MBIPQ9NS73 344 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 CHPF2Q9P2E5 772 aa17.96■□□□□ 0.47
RTTN-221ENST00000640736 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
RTTN-221ENST00000640736 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
RTTN-221ENST00000640736 RBM46Q8TBY0 533 aaKnown RBP17.95■□□□□ 0.46
RTTN-221ENST00000640736 C7orf43Q8WVR3 580 aa17.95■□□□□ 0.46
RTTN-221ENST00000640736 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
RTTN-221ENST00000640736 PARP10Q53GL7 1025 aa17.94■□□□□ 0.46
RTTN-221ENST00000640736 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
RTTN-221ENST00000640736 CEP350Q5VT06 3117 aa17.93■□□□□ 0.46
RTTN-221ENST00000640736 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
RTTN-221ENST00000640736 HOXB7P09629 217 aa17.93■□□□□ 0.46
RTTN-221ENST00000640736 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
RTTN-221ENST00000640736 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
RTTN-221ENST00000640736 UTP14AQ9BVJ6 771 aaKnown RBP17.93■□□□□ 0.46
RTTN-221ENST00000640736 IFT57Q9NWB7 429 aa17.93■□□□□ 0.46
RTTN-221ENST00000640736 ZNF853P0CG23 659 aa17.92■□□□□ 0.46
RTTN-221ENST00000640736 GNAI1P63096 354 aa17.92■□□□□ 0.46
RTTN-221ENST00000640736 FKBP4Q02790 459 aaKnown RBP eCLIP17.92■□□□□ 0.46
RTTN-221ENST00000640736 CALD1Q05682 793 aaKnown RBP17.92■□□□□ 0.46
RTTN-221ENST00000640736 DPY19L2Q6NUT2 758 aa17.92■□□□□ 0.46
RTTN-221ENST00000640736 WDR90Q96KV7 1748 aa17.92■□□□□ 0.46
RTTN-221ENST00000640736 LAMB2P55268 1798 aa17.91■□□□□ 0.46
RTTN-221ENST00000640736 VEGFAP15692 232 aaPredicted RBP17.91■□□□□ 0.46
RTTN-221ENST00000640736 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
RTTN-221ENST00000640736 RTKN2Q8IZC4 609 aa17.91■□□□□ 0.46
RTTN-221ENST00000640736 ZNF428Q96B54 188 aa17.91■□□□□ 0.46
RTTN-221ENST00000640736 ZNF277Q9NRM2 450 aaPredicted RBP17.91■□□□□ 0.46
RTTN-221ENST00000640736 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
RTTN-221ENST00000640736 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
RTTN-221ENST00000640736 ANP32CO43423 234 aa17.9■□□□□ 0.46
RTTN-221ENST00000640736 TCIRG1Q13488 830 aa17.9■□□□□ 0.46
RTTN-221ENST00000640736 NLRP10Q86W26 655 aa17.9■□□□□ 0.46
RTTN-221ENST00000640736 RBM17Q96I25 401 aaKnown RBP17.9■□□□□ 0.46
RTTN-221ENST00000640736 NLRP3Q96P20 1036 aa17.9■□□□□ 0.46
RTTN-221ENST00000640736 TCERG1O14776 1098 aaKnown RBP17.89■□□□□ 0.45
RTTN-221ENST00000640736 ABCB7O75027 752 aa17.89■□□□□ 0.45
RTTN-221ENST00000640736 HOXA10P31260 410 aaPredicted RBP17.89■□□□□ 0.45
RTTN-221ENST00000640736 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
RTTN-221ENST00000640736 DDNO94850 711 aaPredicted RBP17.88■□□□□ 0.45
RTTN-221ENST00000640736 APLP1P51693 650 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 FSTL1Q12841 308 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 ANKRD13DQ6ZTN6 518 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 PLBD2Q8NHP8 589 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 CRAMP1Q96RY5 1269 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 HYPKQ9NX55 129 aa17.88■□□□□ 0.45
RTTN-221ENST00000640736 TRMT112Q9UI30 125 aaKnown RBP17.88■□□□□ 0.45
RTTN-221ENST00000640736 POTECB2RU33 542 aa17.87■□□□□ 0.45
RTTN-221ENST00000640736 PPEF1O14829 653 aaPredicted RBP17.87■□□□□ 0.45
RTTN-221ENST00000640736 HCLS1P14317 486 aaPredicted RBP17.87■□□□□ 0.45
RTTN-221ENST00000640736 SLC10A5Q5PT55 438 aa17.87■□□□□ 0.45
RTTN-221ENST00000640736 SLC51AQ86UW1 340 aa17.87■□□□□ 0.45
RTTN-221ENST00000640736 SMC1BQ8NDV3 1235 aa17.87■□□□□ 0.45
RTTN-221ENST00000640736 RNF123Q5XPI4 1314 aa17.87■□□□□ 0.45
RTTN-221ENST00000640736 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
RTTN-221ENST00000640736 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
RTTN-221ENST00000640736 SNED1Q8TER0 1413 aa17.86■□□□□ 0.45
RTTN-221ENST00000640736 TAF1P21675 1872 aa17.86■□□□□ 0.45
RTTN-221ENST00000640736 ATP5J2-PTCD1G3V325 749 aa17.85■□□□□ 0.45
RTTN-221ENST00000640736 ABCC4O15439 1325 aa17.85■□□□□ 0.45
RTTN-221ENST00000640736 CC2D2BQ6DHV5 1058 aa17.85■□□□□ 0.45
RTTN-221ENST00000640736 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
RTTN-221ENST00000640736 SH3TC1Q8TE82 1336 aa17.85■□□□□ 0.45
RTTN-221ENST00000640736 PSMD1Q99460 953 aa17.85■□□□□ 0.45
RTTN-221ENST00000640736 ZNF541Q9H0D2 1346 aa17.84■□□□□ 0.45
RTTN-221ENST00000640736 TSR2Q969E8 191 aaKnown RBP17.84■□□□□ 0.45
RTTN-221ENST00000640736 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
RTTN-221ENST00000640736 PHAXQ9H814 394 aaKnown RBP17.84■□□□□ 0.45
RTTN-221ENST00000640736 HTRA3P83110 453 aa17.83■□□□□ 0.44
RTTN-221ENST00000640736 GOLGA2Q08379 1002 aa17.83■□□□□ 0.44
RTTN-221ENST00000640736 SCN4AP35499 1836 aa17.83■□□□□ 0.44
RTTN-221ENST00000640736 CCDC27Q2M243 656 aa17.82■□□□□ 0.44
RTTN-221ENST00000640736 RIC3Q7Z5B4 369 aa17.82■□□□□ 0.44
RTTN-221ENST00000640736 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
RTTN-221ENST00000640736 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
RTTN-221ENST00000640736 FAM89AQ96GI7 184 aa17.82■□□□□ 0.44
RTTN-221ENST00000640736 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
RTTN-221ENST00000640736 COL4A5P29400 1685 aa17.81■□□□□ 0.44
RTTN-221ENST00000640736 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
RTTN-221ENST00000640736 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
RTTN-221ENST00000640736 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
RTTN-221ENST00000640736 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
RTTN-221ENST00000640736 JDP2Q8WYK2 163 aa17.81■□□□□ 0.44
RTTN-221ENST00000640736 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
RTTN-221ENST00000640736 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
RTTN-221ENST00000640736 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
RTTN-221ENST00000640736 FZD9O00144 591 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms