RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 DDX21Q9NR30 783 aaKnown RBP eCLIP23.89■■□□□ 1.41
VPS72-207ENST00000640458 FAM177BA6PVY3 158 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 LMOD3Q0VAK6 560 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 CLEC4GQ6UXB4 293 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 TPTE2Q6XPS3 522 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 GPC2Q8N158 579 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 ZNF652Q9Y2D9 606 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 USP16Q9Y5T5 823 aa23.88■■□□□ 1.41
VPS72-207ENST00000640458 DLG5Q8TDM6 1919 aa23.87■■□□□ 1.41
VPS72-207ENST00000640458 KLRG2A4D1S0 409 aaPredicted RBP23.87■■□□□ 1.41
VPS72-207ENST00000640458 CAPNS2Q96L46 248 aa23.87■■□□□ 1.41
VPS72-207ENST00000640458 GJA3Q9Y6H8 435 aa23.87■■□□□ 1.41
VPS72-207ENST00000640458 BCORQ6W2J9 1755 aa23.87■■□□□ 1.41
VPS72-207ENST00000640458 FMR1Q06787 632 aaKnown RBP eCLIP23.86■■□□□ 1.41
VPS72-207ENST00000640458 JDP2Q8WYK2 163 aa23.86■■□□□ 1.41
VPS72-207ENST00000640458 MIS18AQ9NYP9 233 aa23.86■■□□□ 1.41
VPS72-207ENST00000640458 NIP7Q9Y221 180 aaKnown RBP eCLIP23.86■■□□□ 1.41
VPS72-207ENST00000640458 RRP7AQ9Y3A4 280 aaKnown RBP23.86■■□□□ 1.41
VPS72-207ENST00000640458 GPR101Q96P66 508 aaPredicted RBP23.85■■□□□ 1.41
VPS72-207ENST00000640458 PRAMEF22A3QJZ6 481 aa23.84■■□□□ 1.41
VPS72-207ENST00000640458 SNRPA1P09661 255 aaKnown RBP23.84■■□□□ 1.41
VPS72-207ENST00000640458 LMOD1P29536 600 aaPredicted RBP23.84■■□□□ 1.41
VPS72-207ENST00000640458 ALDH1B1P30837 517 aa23.84■■□□□ 1.41
VPS72-207ENST00000640458 ECE1P42892 770 aa23.84■■□□□ 1.41
VPS72-207ENST00000640458 EIF6P56537 245 aaKnown RBP23.84■■□□□ 1.41
VPS72-207ENST00000640458 CYP4F22Q6NT55 531 aa23.84■■□□□ 1.41
VPS72-207ENST00000640458 NEUROD2Q15784 382 aa23.83■■□□□ 1.41
VPS72-207ENST00000640458 TSKSQ9UJT2 592 aa23.83■■□□□ 1.41
VPS72-207ENST00000640458 GTF2E1P29083 439 aaPredicted RBP23.82■■□□□ 1.4
VPS72-207ENST00000640458 RGS19P49795 217 aa23.82■■□□□ 1.4
VPS72-207ENST00000640458 TRIM35Q9UPQ4 493 aa23.82■■□□□ 1.4
VPS72-207ENST00000640458 CFAP44Q96MT7 982 aa23.81■■□□□ 1.4
VPS72-207ENST00000640458 BABAM1Q9NWV8 329 aa23.81■■□□□ 1.4
VPS72-207ENST00000640458 EPS15P42566 896 aa23.8■■□□□ 1.4
VPS72-207ENST00000640458 EIF4A1P60842 406 aaKnown RBP23.8■■□□□ 1.4
VPS72-207ENST00000640458 PSMD1Q99460 953 aa23.8■■□□□ 1.4
VPS72-207ENST00000640458 MRS2Q9HD23 443 aa23.8■■□□□ 1.4
VPS72-207ENST00000640458 TRAF5O00463 557 aa23.79■■□□□ 1.4
VPS72-207ENST00000640458 CST9Q5W186 159 aa23.78■■□□□ 1.4
VPS72-207ENST00000640458 TSPYL4Q9UJ04 414 aa23.78■■□□□ 1.4
VPS72-207ENST00000640458 APAF1O14727 1248 aa23.77■■□□□ 1.4
VPS72-207ENST00000640458 AOC2O75106 756 aa23.77■■□□□ 1.4
VPS72-207ENST00000640458 PCDH10Q9P2E7 1040 aa23.77■■□□□ 1.4
VPS72-207ENST00000640458 THSD7BQ9C0I4 1608 aa23.77■■□□□ 1.4
VPS72-207ENST00000640458 LTBP1Q14766 1721 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 KDM3BQ7LBC6 1761 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 NBPF26B4DH59 902 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 SCNN1DP51172 638 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 HLFQ16534 295 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
VPS72-207ENST00000640458 NBPF10Q6P3W6 841 aaKnown RBP23.76■■□□□ 1.39
VPS72-207ENST00000640458 LARGE2Q8N3Y3 721 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 NBPF15Q8N660 670 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 TLL2Q9Y6L7 1015 aa23.76■■□□□ 1.39
VPS72-207ENST00000640458 COL4A5P29400 1685 aa23.75■■□□□ 1.39
VPS72-207ENST00000640458 MAP2K2P36507 400 aa23.74■■□□□ 1.39
VPS72-207ENST00000640458 CC2D2BQ6DHV5 1058 aa23.74■■□□□ 1.39
VPS72-207ENST00000640458 USP50Q70EL3 339 aaPredicted RBP23.74■■□□□ 1.39
VPS72-207ENST00000640458 NUTM1Q86Y26 1132 aa23.74■■□□□ 1.39
VPS72-207ENST00000640458 MCOLN1Q9GZU1 580 aa23.74■■□□□ 1.39
VPS72-207ENST00000640458 SNED1Q8TER0 1413 aa23.74■■□□□ 1.39
VPS72-207ENST00000640458 CHL1O00533 1208 aa23.73■■□□□ 1.39
VPS72-207ENST00000640458 RGL2O15211 777 aa23.73■■□□□ 1.39
VPS72-207ENST00000640458 TCERG1O14776 1098 aaKnown RBP23.72■■□□□ 1.39
VPS72-207ENST00000640458 CRY2Q49AN0 593 aa23.72■■□□□ 1.39
VPS72-207ENST00000640458 RPGRQ92834 1020 aaKnown RBP23.72■■□□□ 1.39
VPS72-207ENST00000640458 TRPM7Q96QT4 1865 aa23.72■■□□□ 1.39
VPS72-207ENST00000640458 ABCC12Q96J65 1359 aa23.71■■□□□ 1.39
VPS72-207ENST00000640458 NYXQ9GZU5 481 aa23.71■■□□□ 1.39
VPS72-207ENST00000640458 NIM1KQ8IY84 436 aa23.7■■□□□ 1.38
VPS72-207ENST00000640458 NGEFQ8N5V2 710 aa23.7■■□□□ 1.38
VPS72-207ENST00000640458 CA12O43570 354 aa23.69■■□□□ 1.38
VPS72-207ENST00000640458 CELF2O95319 508 aaKnown RBP23.69■■□□□ 1.38
VPS72-207ENST00000640458 SLC51AQ86UW1 340 aa23.69■■□□□ 1.38
VPS72-207ENST00000640458 GRIPAP1Q4V328 841 aa23.68■■□□□ 1.38
VPS72-207ENST00000640458 SAPCD2Q86UD0 394 aa23.68■■□□□ 1.38
VPS72-207ENST00000640458 LAS1LQ9Y4W2 734 aaKnown RBP23.68■■□□□ 1.38
VPS72-207ENST00000640458 CASP8AP2Q9UKL3 1982 aa23.68■■□□□ 1.38
VPS72-207ENST00000640458 CALD1Q05682 793 aaKnown RBP23.67■■□□□ 1.38
VPS72-207ENST00000640458 DGKZQ13574 1117 aa23.67■■□□□ 1.38
VPS72-207ENST00000640458 ADARB2Q9NS39 739 aaKnown RBP23.67■■□□□ 1.38
VPS72-207ENST00000640458 PPIP5K2O43314 1243 aa23.66■■□□□ 1.38
VPS72-207ENST00000640458 ZNF853P0CG23 659 aa23.66■■□□□ 1.38
VPS72-207ENST00000640458 HOXA10P31260 410 aaPredicted RBP23.66■■□□□ 1.38
VPS72-207ENST00000640458 RBM17Q96I25 401 aaKnown RBP23.66■■□□□ 1.38
VPS72-207ENST00000640458 GLIS2Q9BZE0 524 aaPredicted RBP23.66■■□□□ 1.38
VPS72-207ENST00000640458 GPRC5DQ9NZD1 345 aa23.66■■□□□ 1.38
VPS72-207ENST00000640458 PPEF1O14829 653 aaPredicted RBP23.65■■□□□ 1.38
VPS72-207ENST00000640458 AOC3Q16853 763 aa23.65■■□□□ 1.38
VPS72-207ENST00000640458 NCBP3Q53F19 620 aaKnown RBP23.65■■□□□ 1.38
VPS72-207ENST00000640458 ZNF408Q9H9D4 720 aa23.65■■□□□ 1.38
VPS72-207ENST00000640458 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
VPS72-207ENST00000640458 ERBB4Q15303 1308 aa23.64■■□□□ 1.38
VPS72-207ENST00000640458 GPTP24298 496 aa23.64■■□□□ 1.37
VPS72-207ENST00000640458 BRPF1P55201 1214 aaPredicted RBP23.64■■□□□ 1.37
VPS72-207ENST00000640458 CCDC27Q2M243 656 aa23.64■■□□□ 1.37
VPS72-207ENST00000640458 CIAPIN1Q6FI81 312 aa23.64■■□□□ 1.37
VPS72-207ENST00000640458 CRAMP1Q96RY5 1269 aa23.64■■□□□ 1.37
VPS72-207ENST00000640458 IFT57Q9NWB7 429 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms