RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 KLHL40Q2TBA0 621 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 SLC4A8Q2Y0W8 1093 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 OTUD6AQ7L8S5 288 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 KRI1Q8N9T8 703 aaKnown RBP7.15□□□□□ -1.27
NECAP1-222ENST00000640072 CCDC112Q8NEF3 446 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 CENPTQ96BT3 561 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 RMDN2Q96LZ7 410 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 AGAP3Q96P47 875 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 CRACR2AQ9BSW2 395 aa7.15□□□□□ -1.27
NECAP1-222ENST00000640072 SMC2O95347 1197 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 C9orf131Q5VYM1 1079 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 LEKR1Q6ZMV7 388 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 ARMC9Q7Z3E5 817 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 TMEM110Q86TL2 294 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 TXNDC2Q86VQ3 553 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 LSM14AQ8ND56 463 aaKnown RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 ZNF397Q8NF99 534 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 DHX36Q9H2U1 1008 aaKnown RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 CLK1P49759 484 aaKnown RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 RWDD2BP57060 319 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 NUCB2P80303 420 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 RASSF7Q02833 373 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 AGAP9Q5VTM2 703 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 FAAH2Q6GMR7 532 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 RELL1Q8IUW5 271 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 TRIM42Q8IWZ5 723 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 CCDC65Q8IXS2 484 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 C17orf53Q8N3J3 647 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 PPM1EQ8WY54 764 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 IWS1Q96ST2 819 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 SLC7A5P2Q9GIP4 190 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 PDGFDQ9GZP0 370 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 SMARCA1P28370 1054 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 DDB1Q16531 1140 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 CCDC178Q5BJE1 867 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 SAMD14Q8IZD0 417 aaPredicted RBP7.14□□□□□ -1.27
NECAP1-222ENST00000640072 BCL2L13Q9BXK5 485 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 DNAI2Q9GZS0 605 aa7.14□□□□□ -1.27
NECAP1-222ENST00000640072 SASH1O94885 1247 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 ADCY2Q08462 1091 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 EXOC1Q9NV70 894 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 MAPK8IP3Q9UPT6 1336 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 MMEP08473 750 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 PRIM1P49642 420 aaKnown RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 MUM1L1Q5H9M0 696 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 HDGFL2Q7Z4V5 671 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 TANGO6Q9C0B7 1094 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 TTC12Q9H892 705 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 TMEM165Q9HC07 324 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 COMMD8Q9NX08 183 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 C6orf203Q9P0P8 240 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 SEL1LQ9UBV2 794 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 SLC45A1Q9Y2W3 748 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 SEC24BO95487 1268 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 MAGEA9P43362 315 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 NCBP1Q09161 790 aaKnown RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 FKBP5Q13451 457 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 SNX32Q86XE0 403 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 GABPB2Q8TAK5 448 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 MRFAP1L1Q96HT8 127 aa7.13□□□□□ -1.27
NECAP1-222ENST00000640072 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.13□□□□□ -1.27
NECAP1-222ENST00000640072 CLIP1P30622 1438 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 TSPY4P0CV99 314 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 TSPY10P0CW01 314 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 ZNF445P59923 1031 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 PTK7Q13308 1070 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 RBBP5Q15291 538 aaKnown RBP7.12□□□□□ -1.27
NECAP1-222ENST00000640072 PDCD2Q16342 344 aaPredicted RBP7.12□□□□□ -1.27
NECAP1-222ENST00000640072 EFCAB2Q5VUJ9 269 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 GBP6Q6ZN66 633 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 MMS22LQ6ZRQ5 1243 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 NLGN1Q8N2Q7 840 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 RTF1Q92541 710 aaKnown RBP7.12□□□□□ -1.27
NECAP1-222ENST00000640072 GTF3C6Q969F1 213 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 EVLQ9UI08 416 aaPredicted RBP7.12□□□□□ -1.27
NECAP1-222ENST00000640072 ODF2LQ9ULJ1 636 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 TBC1D2BQ9UPU7 963 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 GJA8P48165 433 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 ZSCAN23Q3MJ62 389 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 EGFLAMQ63HQ2 1017 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 MCTP1Q6DN14 999 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 C8orf37Q96NL8 207 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 PLSCR2Q9NRY7 297 aa7.12□□□□□ -1.27
NECAP1-222ENST00000640072 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.12□□□□□ -1.27
NECAP1-222ENST00000640072 PDE3BQ13370 1112 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 COBLL1Q53SF7 1204 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 FKBP15Q5T1M5 1219 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 LLGL2Q6P1M3 1020 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 SRLQ86TD4 932 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 CCDC89Q8N998 374 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 ERP27Q96DN0 273 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 TBC1D32Q96NH3 1257 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 SH3GL3Q99963 347 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 SLC39A3Q9BRY0 314 aa7.11□□□□□ -1.27
NECAP1-222ENST00000640072 ZNHIT6Q9NWK9 470 aaKnown RBP7.11□□□□□ -1.27
NECAP1-222ENST00000640072 ZNF652Q9Y2D9 606 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms