RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ACBD3Q9H3P7 528 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 AMOTL2Q9Y2J4 779 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
SCARB2-218ENST00000639715 IL13P35225 146 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 AMOTQ4VCS5 1084 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 EGFL6Q8IUX8 553 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 TSPYL6Q8N831 410 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 PIK3R5Q8WYR1 880 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 SIRT1Q96EB6 747 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.63□□□□□ -1.35
SCARB2-218ENST00000639715 VWDEQ8N2E2 1590 aa6.63□□□□□ -1.35
SCARB2-218ENST00000639715 F6X3S4 739 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 SDSP20132 328 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 AIMP1Q12904 312 aaKnown RBP6.62□□□□□ -1.35
SCARB2-218ENST00000639715 EIF4A2Q14240 407 aaKnown RBP6.62□□□□□ -1.35
SCARB2-218ENST00000639715 IL1RAPL2Q9NP60 686 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 NLRP2Q9NX02 1062 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 FBLN1P23142 703 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 NF2P35240 595 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 ELF2Q15723 593 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 GRIPAP1Q4V328 841 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 CCDC73Q6ZRK6 1079 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 ANKLE2Q86XL3 938 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 BTBD11A6QL63 1104 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 KRT85P78386 507 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 KRT32Q14532 448 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 PLEKHM2Q8IWE5 1019 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 ANKRD7Q92527 254 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 TRMT1Q9NXH9 659 aaKnown RBP6.62□□□□□ -1.35
SCARB2-218ENST00000639715 DONSONQ9NYP3 566 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 MED14O60244 1454 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 PDE1AP54750 535 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 NAA30Q147X3 362 aaPredicted RBP6.62□□□□□ -1.35
SCARB2-218ENST00000639715 HSP90AB2PQ58FF8 381 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 PLEKHF1Q96S99 279 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 MEIS3Q99687 375 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 SH2B1Q9NRF2 756 aaPredicted RBP6.62□□□□□ -1.35
SCARB2-218ENST00000639715 LMBRD1Q9NUN5 540 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 PIK3R4Q99570 1358 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 EFCAB6Q5THR3 1501 aa6.62□□□□□ -1.35
SCARB2-218ENST00000639715 CFAP65Q6ZU64 1925 aaKnown RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 SPHKAPQ2M3C7 1700 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 TULP2O00295 520 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 SLU7O95391 586 aaKnown RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CCDC192P0DO97 292 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 DNAJC21Q5F1R6 531 aaKnown RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CEP85Q6P2H3 762 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CENPHQ9H3R5 247 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 TAOK2Q9UL54 1235 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CLTCL1P53675 1640 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 IBTKQ9P2D0 1353 aaPredicted RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CPLX1O14810 134 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 FIBPO43427 364 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 ATP8B2P98198 1209 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 TRDNQ13061 729 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 AP1ARQ63HQ0 302 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 BLOC1S2Q6QNY1 142 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CCDC186Q7Z3E2 898 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 PDRG1Q9NUG6 133 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 TMEM63CQ9P1W3 806 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 DBF4Q9UBU7 674 aaPredicted RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 FLT4P35916 1363 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 ATF3P18847 181 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CYP2C19P33261 490 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 MCTP2Q6DN12 878 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 RBM42Q9BTD8 480 aaKnown RBP6.61□□□□□ -1.35
SCARB2-218ENST00000639715 BABAM1Q9NWV8 329 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
SCARB2-218ENST00000639715 CHL1O00533 1208 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 LARP1BQ659C4 914 aaKnown RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 CWC27Q6UX04 472 aaKnown RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 AACSQ86V21 672 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 NUTM1Q86Y26 1132 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 RNF217Q8TC41 542 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 FAM107BQ9H098 131 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 ST7Q9NRC1 585 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 PHF8Q9UPP1 1060 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 LIMCH1Q9UPQ0 1083 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 UGGT1Q9NYU2 1555 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 PTGS1P23219 599 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 SEMA3FQ13275 785 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 JAKMIP1Q96N16 626 aaKnown RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 GDPD2Q9HCC8 539 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 SHPRHQ149N8 1683 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 SMC2O95347 1197 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 ATP2B1P20020 1258 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 LARP1Q6PKG0 1096 aaKnown RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 SYNE3Q6ZMZ3 975 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 ERO1AQ96HE7 468 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 NEUROD6Q96NK8 337 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 USP26Q9BXU7 913 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 UPF3BQ9BZI7 483 aaKnown RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 NAT10Q9H0A0 1025 aaKnown RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 ZNF215Q9UL58 517 aaPredicted RBP6.6□□□□□ -1.35
SCARB2-218ENST00000639715 KIAA0232Q92628 1395 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 ABCC4O15439 1325 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 CCDC196A0A1B0GTZ2 297 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 NBPF20Q3BBV1 942 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms