RNA–Protein interactions for RNA: ENST00000639525.1

SPIN3-223, Transcript of spindlin family member 3, human

TSL 5 BASIC

Gene SPIN3, Length 3,958 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-223	ENST00000639525	CDC37L1	Q7L3B6	337 aa		13.87	□□□□□ -0.19
SPIN3-223	ENST00000639525	SSH3	Q8TE77	659 aa		13.87	□□□□□ -0.19
SPIN3-223	ENST00000639525	ZBTB9	Q96C00	473 aa		13.87	□□□□□ -0.19
SPIN3-223	ENST00000639525	KIAA0232	Q92628	1395 aa		13.87	□□□□□ -0.19
SPIN3-223	ENST00000639525	MLH3	Q9UHC1	1453 aa		13.87	□□□□□ -0.19
SPIN3-223	ENST00000639525	CEP152	O94986	1710 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	JAK2	O60674	1132 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	EIF4A1	P60842	406 aa	Known RBP	13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	TIMM10	P62072	90 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	CCDC144CP	Q8IYA2	1237 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	CCDC112	Q8NEF3	446 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	CEP126	Q9P2H0	1117 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	NLRP1	Q9C000	1473 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	TTC39A	Q5SRH9	613 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	CPLX2	Q6PUV4	134 aa	Known RBP	13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	PDCL2	Q8N4E4	241 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	MTMR7	Q9Y216	660 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	SETD1B	Q9UPS6	1966 aa	Known RBP	13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	CCDC171	Q6TFL3	1326 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	GC	P02774	474 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	IFIT1	P09914	478 aa	Known RBP	13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	AMOT	Q4VCS5	1084 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	HSP90AA4P	Q58FG1	418 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	EAF2	Q96CJ1	260 aa	Predicted RBP	13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	CFAP45	Q9UL16	551 aa		13.86	□□□□□ -0.19
SPIN3-223	ENST00000639525	PPRC1	Q5VV67	1664 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	IDH1	O75874	414 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	TRIM29	Q14134	588 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	DDX17	Q92841	729 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	SEC62	Q99442	399 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525		A0A087WWV3	80 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	TNNT1	P13805	278 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	TYRO3	Q06418	890 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	TFCP2	Q12800	502 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	CCDC57	Q2TAC2	916 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	PPP4R3B	Q5MIZ7	849 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	LINS1	Q8NG48	757 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	SBNO1	A3KN83	1393 aa		13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	TLR7	Q9NYK1	1049 aa	Known RBP	13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.85	□□□□□ -0.19
SPIN3-223	ENST00000639525	TTLL5	Q6EMB2	1281 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	RASSF8	Q8NHQ8	419 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	NCOA5	Q9HCD5	579 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	AK9	Q5TCS8	1911 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	AKAP4	Q5JQC9	854 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	KRT28	Q7Z3Y7	464 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	FSIP1	Q8NA03	581 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	ADGRB3	O60242	1522 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	LIG1	P18858	919 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	GPT	P24298	496 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	APOBR	Q0VD83	1088 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	KRT32	Q14532	448 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	CCDC158	Q5M9N0	1113 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525	CNNM1	Q9NRU3	951 aa		13.84	□□□□□ -0.19
SPIN3-223	ENST00000639525		A0A0D9SFI3	127 aa		13.83	□□□□□ -0.19
SPIN3-223	ENST00000639525	OTUD7B	Q6GQQ9	843 aa		13.83	□□□□□ -0.19
SPIN3-223	ENST00000639525	DBNDD2	Q9BQY9	259 aa		13.83	□□□□□ -0.19
SPIN3-223	ENST00000639525	OSBPL3	Q9H4L5	887 aa		13.83	□□□□□ -0.19
SPIN3-223	ENST00000639525	SLC27A2	O14975	620 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	RNMT	O43148	476 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	GTF2E1	P29083	439 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	MCM5	P33992	734 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	CCAR1	Q8IX12	1150 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	ZNF396	Q96N95	335 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	TMX1	Q9H3N1	280 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	TPCN1	Q9ULQ1	816 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	BEND3	Q5T5X7	828 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	VPS53	Q5VIR6	699 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	PRDM11	Q9NQV5	511 aa		13.83	□□□□□ -0.2
SPIN3-223	ENST00000639525	FAM200A	Q8TCP9	573 aa		13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	AATK	Q6ZMQ8	1374 aa		13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	DYNC1I1	O14576	645 aa		13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	MTERF4	Q7Z6M4	381 aa	Known RBP	13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	IP6K1	Q92551	441 aa		13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	TPM3	P06753	285 aa		13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	DDIT3	P35638	169 aa		13.82	□□□□□ -0.2
SPIN3-223	ENST00000639525	SERPINC1	P01008	464 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	HS1BP3	Q53T59	392 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	PIBF1	Q8WXW3	757 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	LSG1	Q9H089	658 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	NAT10	Q9H0A0	1025 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	TTC41P	Q6P2S7	1318 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	UVSSA	Q2YD98	709 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	MTMR6	Q9Y217	621 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	RXRA	P19793	462 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	LRMP	Q12912	555 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	TTC6	Q86TZ1	520 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	CEP57L1	Q8IYX8	460 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	ZNF594	Q96JF6	807 aa	Predicted RBP	13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	ALDH1L1	O75891	902 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	CUL4A	Q13619	759 aa		13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-223	ENST00000639525	AKAP17A	Q02040	695 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525	TMEM2	Q9UHN6	1383 aa		13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525	SLFNL1	Q499Z3	407 aa		13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525	NUP133	Q8WUM0	1156 aa		13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525	C8orf76	Q96K31	380 aa		13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525	DDX19A	Q9NUU7	478 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525	USP16	Q9Y5T5	823 aa		13.8	□□□□□ -0.2
SPIN3-223	ENST00000639525		U3KPZ7	1027 aa	Predicted RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms