RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TRIM28Q13263 835 aaKnown RBP8□□□□□ -1.13
CCDC7-211ENST00000638889 RTN1Q16799 776 aa8□□□□□ -1.13
CCDC7-211ENST00000638889 XP32Q5T750 250 aa8□□□□□ -1.13
CCDC7-211ENST00000638889 NACC1Q96RE7 527 aa8□□□□□ -1.13
CCDC7-211ENST00000638889 PPP1R12CQ9BZL4 782 aa8□□□□□ -1.13
CCDC7-211ENST00000638889 IGFBP4P22692 258 aa7.99□□□□□ -1.13
CCDC7-211ENST00000638889 PTK7Q13308 1070 aa7.99□□□□□ -1.13
CCDC7-211ENST00000638889 DOC2BQ14184 412 aa7.99□□□□□ -1.13
CCDC7-211ENST00000638889 KANK4Q5T7N3 995 aaPredicted RBP7.99□□□□□ -1.13
CCDC7-211ENST00000638889 RAB44Q7Z6P3 723 aaPredicted RBP7.99□□□□□ -1.13
CCDC7-211ENST00000638889 CHMP7Q8WUX9 453 aaPredicted RBP7.99□□□□□ -1.13
CCDC7-211ENST00000638889 BHMTQ93088 406 aa7.99□□□□□ -1.13
CCDC7-211ENST00000638889 CALR3Q96L12 384 aaKnown RBP7.99□□□□□ -1.13
CCDC7-211ENST00000638889 HINFPQ9BQA5 517 aa7.99□□□□□ -1.13
CCDC7-211ENST00000638889 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
CCDC7-211ENST00000638889 TGFBR3LH3BV60 316 aa7.98□□□□□ -1.13
CCDC7-211ENST00000638889 LILRB5O75023 590 aa7.98□□□□□ -1.13
CCDC7-211ENST00000638889 DPYDQ12882 1025 aa7.98□□□□□ -1.13
CCDC7-211ENST00000638889 CRTC2Q53ET0 693 aaPredicted RBP7.98□□□□□ -1.13
CCDC7-211ENST00000638889 C8orf86Q6ZUL3 223 aa7.97□□□□□ -1.13
CCDC7-211ENST00000638889 NGLY1Q96IV0 654 aa7.97□□□□□ -1.13
CCDC7-211ENST00000638889 GSX2Q9BZM3 304 aa7.97□□□□□ -1.13
CCDC7-211ENST00000638889 ANKMY2Q8IV38 441 aa7.96□□□□□ -1.14
CCDC7-211ENST00000638889 UBE2OQ9C0C9 1292 aaKnown RBP7.96□□□□□ -1.14
CCDC7-211ENST00000638889 SEMA6BQ9H3T3 888 aa7.96□□□□□ -1.14
CCDC7-211ENST00000638889 VRTNQ9H8Y1 702 aa7.96□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L15C9J2P7 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L10C9JJH3 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L13C9JLJ4 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L12C9JPN9 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L11C9JVI0 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L21D6R901 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L18D6R9N7 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L22D6RA61 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L17D6RBQ6 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L19D6RCP7 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L20D6RJB6 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 EPB42P16452 691 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 USP17L24Q0WX57 530 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 CCINQ13939 588 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 Q8N3U1 123 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 C11orf16Q9NQ32 467 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 DMGDHQ9UI17 866 aaKnown RBP7.95□□□□□ -1.14
CCDC7-211ENST00000638889 SLC6A14Q9UN76 642 aa7.95□□□□□ -1.14
CCDC7-211ENST00000638889 C9orf172C9J069 976 aa7.94□□□□□ -1.14
CCDC7-211ENST00000638889 FAM229AH3BQW9 127 aa7.94□□□□□ -1.14
CCDC7-211ENST00000638889 PCSK7Q16549 785 aa7.94□□□□□ -1.14
CCDC7-211ENST00000638889 RSPO4Q2I0M5 234 aaPredicted RBP7.94□□□□□ -1.14
CCDC7-211ENST00000638889 TRAPPC3LQ5T215 181 aa7.94□□□□□ -1.14
CCDC7-211ENST00000638889 PNMA5Q96PV4 448 aa7.94□□□□□ -1.14
CCDC7-211ENST00000638889 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.94□□□□□ -1.14
CCDC7-211ENST00000638889 ITGB7P26010 798 aa7.93□□□□□ -1.14
CCDC7-211ENST00000638889 LMOD1P29536 600 aaPredicted RBP7.93□□□□□ -1.14
CCDC7-211ENST00000638889 BCS1LQ9Y276 419 aa7.93□□□□□ -1.14
CCDC7-211ENST00000638889 FOXO3O43524 673 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 ELNP15502 786 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 TBC1D8BQ0IIM8 1120 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 GRIK4Q16099 956 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 IGFLR1Q9H665 355 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 JPH1Q9HDC5 661 aaPredicted RBP7.92□□□□□ -1.14
CCDC7-211ENST00000638889 TPSG1Q9NRR2 321 aa7.92□□□□□ -1.14
CCDC7-211ENST00000638889 DNAJB12Q9NXW2 375 aaKnown RBP7.92□□□□□ -1.14
CCDC7-211ENST00000638889 A0A0A0MRY4 1105 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 MAP3K6O95382 1288 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 NFKB1P19838 968 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 WEE1P30291 646 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 INPP5BP32019 993 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 RAC1P63000 192 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 ARXQ96QS3 562 aa7.91□□□□□ -1.14
CCDC7-211ENST00000638889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC7-211ENST00000638889 RGS9O75916 674 aaPredicted RBP7.9□□□□□ -1.14
CCDC7-211ENST00000638889 IDH3AP50213 366 aa7.9□□□□□ -1.14
CCDC7-211ENST00000638889 NRG1Q02297 640 aaPredicted RBP7.9□□□□□ -1.14
CCDC7-211ENST00000638889 ADGRE1Q14246 886 aa7.9□□□□□ -1.14
CCDC7-211ENST00000638889 PSAPL1Q6NUJ1 521 aa7.9□□□□□ -1.14
CCDC7-211ENST00000638889 ILDR2Q71H61 639 aa7.9□□□□□ -1.14
CCDC7-211ENST00000638889 MYO19Q96H55 970 aa7.9□□□□□ -1.14
CCDC7-211ENST00000638889 ARSDP51689 593 aa7.89□□□□□ -1.15
CCDC7-211ENST00000638889 AFF1P51825 1210 aaKnown RBP7.89□□□□□ -1.15
CCDC7-211ENST00000638889 C11orf91Q3C1V1 193 aa7.89□□□□□ -1.15
CCDC7-211ENST00000638889 NUDT8Q8WV74 236 aa7.89□□□□□ -1.15
CCDC7-211ENST00000638889 VTI1AQ96AJ9 217 aa7.89□□□□□ -1.15
CCDC7-211ENST00000638889 LENG1Q96BZ8 264 aaPredicted RBP7.89□□□□□ -1.15
CCDC7-211ENST00000638889 KLK14Q9P0G3 267 aa7.89□□□□□ -1.15
CCDC7-211ENST00000638889 FRRS1LQ9P0K9 344 aa7.89□□□□□ -1.15
CCDC7-211ENST00000638889 DYRK3O43781 588 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 LGR5O75473 907 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 SELPP16109 830 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
CCDC7-211ENST00000638889 DGKZQ13574 1117 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 ZMYM1Q5SVZ6 1142 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 FAM200AQ8TCP9 573 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
CCDC7-211ENST00000638889 NAGPAQ9UK23 515 aa7.88□□□□□ -1.15
CCDC7-211ENST00000638889 MICAL2O94851 1124 aa7.87□□□□□ -1.15
CCDC7-211ENST00000638889 MBTPS1Q14703 1052 aa7.87□□□□□ -1.15
CCDC7-211ENST00000638889 DTWD1Q8N5C7 304 aa7.87□□□□□ -1.15
CCDC7-211ENST00000638889 TRPM4Q8TD43 1214 aa7.87□□□□□ -1.15
CCDC7-211ENST00000638889 H2AFB1P0C5Y9 115 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms