RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 CUX2O14529 1486 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 BAG4O95429 457 aaKnown RBP14.97□□□□□ -0.01
UBE3A-228ENST00000638155 GEN1Q17RS7 908 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 AKAP2Q9Y2D5 859 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 ATP5DP30049 168 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 NBPF11Q86T75 865 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 ZNF365Q70YC5 407 aa14.97□□□□□ -0.01
UBE3A-228ENST00000638155 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
UBE3A-228ENST00000638155 SH3BGRP55822 239 aaPredicted RBP14.96□□□□□ -0.01
UBE3A-228ENST00000638155 GOLGA8AA7E2F4 631 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 GOLGA8BA8MQT2 603 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 FYB2Q5VWT5 728 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 UTP14AQ9BVJ6 771 aaKnown RBP14.96□□□□□ -0.01
UBE3A-228ENST00000638155 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.96□□□□□ -0.017e-9■■■□□ 18.2
UBE3A-228ENST00000638155 SPAG5Q96R06 1193 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 USP37Q86T82 979 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 GOLGA1Q92805 767 aa14.96□□□□□ -0.01
UBE3A-228ENST00000638155 WHAMMP3Q1A5X7 153 aa14.96□□□□□ -0.02
UBE3A-228ENST00000638155 SH2B1Q9NRF2 756 aaPredicted RBP14.96□□□□□ -0.02
UBE3A-228ENST00000638155 BICD1Q96G01 975 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 CACYBPQ9HB71 228 aaKnown RBP14.95□□□□□ -0.02
UBE3A-228ENST00000638155 KANK3Q6NY19 840 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 VCX3AQ9NNX9 186 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 NOB1Q9ULX3 412 aaKnown RBP14.95□□□□□ -0.02
UBE3A-228ENST00000638155 TRPC3Q13507 836 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 MIER3Q7Z3K6 550 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 VPS18Q9P253 973 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 GKAP1Q5VSY0 366 aaPredicted RBP14.95□□□□□ -0.02
UBE3A-228ENST00000638155 CTAGE1Q96RT6 745 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 FAM76AQ8TAV0 307 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 ANKRD24Q8TF21 1146 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 MTUS1Q9ULD2 1270 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 TBC1D31Q96DN5 1066 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
UBE3A-228ENST00000638155 CCDC194A0A1B0GVG4 234 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 TCP11L1Q9NUJ3 509 aa14.95□□□□□ -0.02
UBE3A-228ENST00000638155 CCDC89Q8N998 374 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 CHD1LQ86WJ1 897 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 NUTM2BA6NNL0 878 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 NUTM2EB1AL46 878 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 FCHSD2O94868 740 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 AFAP1L2Q8N4X5 818 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 ZC4H2Q9NQZ6 224 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 EXOC1Q9NV70 894 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 HSPA1LP34931 641 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 GSDMBQ8TAX9 411 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 USP25Q9UHP3 1055 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 CKAP2LQ8IYA6 745 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 DDX19AQ9NUU7 478 aaKnown RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 NAA16Q6N069 864 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 CCDC62Q6P9F0 684 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 KCNK9Q9NPC2 374 aa14.94□□□□□ -0.02
UBE3A-228ENST00000638155 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
UBE3A-228ENST00000638155 CYLC1P35663 651 aaPredicted RBP14.93□□□□□ -0.02
UBE3A-228ENST00000638155 RUFY3Q7L099 469 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 SSRP1Q08945 709 aaKnown RBP14.93□□□□□ -0.02
UBE3A-228ENST00000638155 HVCN1Q96D96 273 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 LMBR1Q8WVP7 490 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 AKR1B10O60218 316 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 LRRC27Q9C0I9 530 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 CRACR2BQ8N4Y2 399 aaPredicted RBP14.93□□□□□ -0.02
UBE3A-228ENST00000638155 SLC12A7Q9Y666 1083 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 STX6O43752 255 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 WDR78Q5VTH9 848 aa14.93□□□□□ -0.02
UBE3A-228ENST00000638155 SCAPERQ9BY12 1400 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 CUL4BQ13620 913 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 SDCCAG8Q86SQ7 713 aaPredicted RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 NKIRAS1Q9NYS0 192 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 BRD4O60885 1362 aaPredicted RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 MCUR1Q96AQ8 359 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 MTRF1LQ9UGC7 380 aaKnown RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 INPP1P49441 399 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 FSIP1Q8NA03 581 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 CETN3O15182 167 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 PDE3AQ14432 1141 aa14.92□□□□□ -0.02
UBE3A-228ENST00000638155 MPHOSPH6Q99547 160 aaKnown RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 XAB2Q9HCS7 855 aaKnown RBP14.92□□□□□ -0.02
UBE3A-228ENST00000638155 SMIM23A6NLE4 172 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 MKNK2Q9HBH9 465 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 FAM169AQ9Y6X4 670 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 CCDC38Q502W7 563 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 EEF2P13639 858 aaKnown RBP14.91□□□□□ -0.02
UBE3A-228ENST00000638155 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
UBE3A-228ENST00000638155 ARHGAP24Q8N264 748 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 TBCAO75347 108 aaKnown RBP14.91□□□□□ -0.02
UBE3A-228ENST00000638155 IDH1O75874 414 aaKnown RBP14.91□□□□□ -0.02
UBE3A-228ENST00000638155 PLEKHO1Q53GL0 409 aaPredicted RBP14.91□□□□□ -0.02
UBE3A-228ENST00000638155 FERMT3Q86UX7 667 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 POLR3DP05423 398 aaPredicted RBP14.91□□□□□ -0.02
UBE3A-228ENST00000638155 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
UBE3A-228ENST00000638155 MAP3K7CLP57077 242 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms