RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-233	ENST00000638031	TCIRG1	Q13488	830 aa		24.44	■■□□□ 1.5
CHRNA7-233	ENST00000638031	NLRP10	Q86W26	655 aa		24.44	■■□□□ 1.5
CHRNA7-233	ENST00000638031	TSPYL6	Q8N831	410 aa		24.44	■■□□□ 1.5
CHRNA7-233	ENST00000638031	ZNF428	Q96B54	188 aa		24.44	■■□□□ 1.5
CHRNA7-233	ENST00000638031	CACNA1S	Q13698	1873 aa		24.43	■■□□□ 1.5
CHRNA7-233	ENST00000638031	PARP10	Q53GL7	1025 aa		24.43	■■□□□ 1.5
CHRNA7-233	ENST00000638031	SLC10A5	Q5PT55	438 aa		24.43	■■□□□ 1.5
CHRNA7-233	ENST00000638031	TSR2	Q969E8	191 aa	Known RBP	24.43	■■□□□ 1.5
CHRNA7-233	ENST00000638031	ARFGEF2	Q9Y6D5	1785 aa		24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	LTBP3	Q9NS15	1303 aa		24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	HOXA10	P31260	410 aa	Predicted RBP	24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	PPP1R42	Q7Z4L9	355 aa		24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	UTP14A	Q9BVJ6	771 aa	Known RBP	24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	PHAX	Q9H814	394 aa	Known RBP	24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	RIC1	Q4ADV7	1423 aa		24.42	■■□□□ 1.5
CHRNA7-233	ENST00000638031	GLTPD2	A6NH11	291 aa		24.41	■■□□□ 1.5
CHRNA7-233	ENST00000638031	ANKRD13D	Q6ZTN6	518 aa		24.41	■■□□□ 1.5
CHRNA7-233	ENST00000638031	PLBD2	Q8NHP8	589 aa		24.41	■■□□□ 1.5
CHRNA7-233	ENST00000638031	RBM46	Q8TBY0	533 aa	Known RBP	24.41	■■□□□ 1.5
CHRNA7-233	ENST00000638031	ALDH1B1	P30837	517 aa		24.4	■■□□□ 1.5
CHRNA7-233	ENST00000638031	TAOK3	Q9H2K8	898 aa		24.4	■■□□□ 1.5
CHRNA7-233	ENST00000638031	HYPK	Q9NX55	129 aa		24.4	■■□□□ 1.5
CHRNA7-233	ENST00000638031	SNED1	Q8TER0	1413 aa		24.39	■■□□□ 1.5
CHRNA7-233	ENST00000638031	NCBP3	Q53F19	620 aa	Known RBP	24.39	■■□□□ 1.49
CHRNA7-233	ENST00000638031	ISCA1	Q9BUE6	129 aa		24.39	■■□□□ 1.49
CHRNA7-233	ENST00000638031	DICER1	Q9UPY3	1922 aa	Known RBP	24.39	■■□□□ 1.49
CHRNA7-233	ENST00000638031	TIAM2	Q8IVF5	1701 aa		24.38	■■□□□ 1.49
CHRNA7-233	ENST00000638031	CCDC93	Q567U6	631 aa		24.38	■■□□□ 1.49
CHRNA7-233	ENST00000638031	HSP90AB3P	Q58FF7	597 aa		24.38	■■□□□ 1.49
CHRNA7-233	ENST00000638031	SALL2	Q9Y467	1007 aa	Predicted RBP	24.38	■■□□□ 1.49
CHRNA7-233	ENST00000638031	ATP5J2-PTCD1	G3V325	749 aa		24.37	■■□□□ 1.49
CHRNA7-233	ENST00000638031	HCLS1	P14317	486 aa	Predicted RBP	24.37	■■□□□ 1.49
CHRNA7-233	ENST00000638031	SOGA3	Q5TF21	947 aa		24.37	■■□□□ 1.49
CHRNA7-233	ENST00000638031	C16orf71	Q8IYS4	520 aa	Predicted RBP	24.37	■■□□□ 1.49
CHRNA7-233	ENST00000638031	POTEC	B2RU33	542 aa		24.36	■■□□□ 1.49
CHRNA7-233	ENST00000638031	TRMT112	Q9UI30	125 aa	Known RBP	24.36	■■□□□ 1.49
CHRNA7-233	ENST00000638031	ANKRD36C	Q5JPF3	1778 aa		24.35	■■□□□ 1.49
CHRNA7-233	ENST00000638031	FAM9B	Q8IZU0	186 aa		24.35	■■□□□ 1.49
CHRNA7-233	ENST00000638031	RPGR	Q92834	1020 aa	Known RBP	24.35	■■□□□ 1.49
CHRNA7-233	ENST00000638031	NLRP3	Q96P20	1036 aa		24.35	■■□□□ 1.49
CHRNA7-233	ENST00000638031	CRAMP1	Q96RY5	1269 aa		24.35	■■□□□ 1.49
CHRNA7-233	ENST00000638031	APLP1	P51693	650 aa		24.34	■■□□□ 1.49
CHRNA7-233	ENST00000638031	FKBP4	Q02790	459 aa	Known RBP eCLIP	24.34	■■□□□ 1.49
CHRNA7-233	ENST00000638031	SPINK5	Q9NQ38	1064 aa	Predicted RBP	24.34	■■□□□ 1.49
CHRNA7-233	ENST00000638031	ZNF277	Q9NRM2	450 aa	Predicted RBP	24.34	■■□□□ 1.49
CHRNA7-233	ENST00000638031	IL16	Q14005	1332 aa		24.34	■■□□□ 1.49
CHRNA7-233	ENST00000638031	TCERG1	O14776	1098 aa	Known RBP	24.33	■■□□□ 1.49
CHRNA7-233	ENST00000638031	VEGFA	P15692	232 aa	Predicted RBP	24.33	■■□□□ 1.49
CHRNA7-233	ENST00000638031	FSTL1	Q12841	308 aa		24.33	■■□□□ 1.49
CHRNA7-233	ENST00000638031	RBM17	Q96I25	401 aa	Known RBP	24.33	■■□□□ 1.49
CHRNA7-233	ENST00000638031	RNF123	Q5XPI4	1314 aa		24.33	■■□□□ 1.48
CHRNA7-233	ENST00000638031	RTKN2	Q8IZC4	609 aa		24.32	■■□□□ 1.48
CHRNA7-233	ENST00000638031	FAM89A	Q96GI7	184 aa		24.32	■■□□□ 1.48
CHRNA7-233	ENST00000638031	TRIM28	Q13263	835 aa	Known RBP	24.31	■■□□□ 1.48
CHRNA7-233	ENST00000638031	CCDC30	Q5VVM6	783 aa		24.31	■■□□□ 1.48
CHRNA7-233	ENST00000638031	DPY19L2	Q6NUT2	758 aa		24.31	■■□□□ 1.48
CHRNA7-233	ENST00000638031	ABCC4	O15439	1325 aa		24.31	■■□□□ 1.48
CHRNA7-233	ENST00000638031	SH3TC1	Q8TE82	1336 aa		24.31	■■□□□ 1.48
CHRNA7-233	ENST00000638031	RIC3	Q7Z5B4	369 aa		24.3	■■□□□ 1.48
CHRNA7-233	ENST00000638031	DNAJC5G	Q8N7S2	189 aa		24.3	■■□□□ 1.48
CHRNA7-233	ENST00000638031	WDR90	Q96KV7	1748 aa		24.3	■■□□□ 1.48
CHRNA7-233	ENST00000638031	PPEF1	O14829	653 aa	Predicted RBP	24.29	■■□□□ 1.48
CHRNA7-233	ENST00000638031	DDN	O94850	711 aa	Predicted RBP	24.29	■■□□□ 1.48
CHRNA7-233	ENST00000638031	TWISTNB	Q3B726	338 aa	Predicted RBP	24.29	■■□□□ 1.48
CHRNA7-233	ENST00000638031	G2E3	Q7L622	706 aa		24.29	■■□□□ 1.48
CHRNA7-233	ENST00000638031	WDR63	Q8IWG1	891 aa		24.29	■■□□□ 1.48
CHRNA7-233	ENST00000638031	FANCI	Q9NVI1	1328 aa		24.29	■■□□□ 1.48
CHRNA7-233	ENST00000638031	RTL5	Q5HYW3	569 aa	Predicted RBP	24.28	■■□□□ 1.48
CHRNA7-233	ENST00000638031	PSMD1	Q99460	953 aa		24.28	■■□□□ 1.48
CHRNA7-233	ENST00000638031	LAMB2	P55268	1798 aa		24.27	■■□□□ 1.48
CHRNA7-233	ENST00000638031	IARS	P41252	1262 aa	Known RBP	24.27	■■□□□ 1.48
CHRNA7-233	ENST00000638031	MYD88	Q99836	296 aa		24.27	■■□□□ 1.48
CHRNA7-233	ENST00000638031	COL4A5	P29400	1685 aa		24.27	■■□□□ 1.48
CHRNA7-233	ENST00000638031	GOLGA2	Q08379	1002 aa		24.26	■■□□□ 1.47
CHRNA7-233	ENST00000638031	CC2D2B	Q6DHV5	1058 aa		24.26	■■□□□ 1.47
CHRNA7-233	ENST00000638031	SMC1B	Q8NDV3	1235 aa		24.26	■■□□□ 1.47
CHRNA7-233	ENST00000638031	HTRA3	P83110	453 aa		24.25	■■□□□ 1.47
CHRNA7-233	ENST00000638031	METTL22	Q9BUU2	404 aa	Predicted RBP	24.25	■■□□□ 1.47
CHRNA7-233	ENST00000638031	ATP6V0A2	Q9Y487	856 aa		24.25	■■□□□ 1.47
CHRNA7-233	ENST00000638031	ZNF541	Q9H0D2	1346 aa		24.25	■■□□□ 1.47
CHRNA7-233	ENST00000638031	VAMP4	O75379	141 aa		24.24	■■□□□ 1.47
CHRNA7-233	ENST00000638031	EXOSC9	Q06265	439 aa	Known RBP	24.24	■■□□□ 1.47
CHRNA7-233	ENST00000638031	JARID2	Q92833	1246 aa	Predicted RBP	24.24	■■□□□ 1.47
CHRNA7-233	ENST00000638031	COL4A1	P02462	1669 aa		24.24	■■□□□ 1.47
CHRNA7-233	ENST00000638031	DDX60	Q8IY21	1712 aa	Known RBP	24.24	■■□□□ 1.47
CHRNA7-233	ENST00000638031	PI4KAP2	A4QPH2	592 aa		24.23	■■□□□ 1.47
CHRNA7-233	ENST00000638031	FZD9	O00144	591 aa		24.23	■■□□□ 1.47
CHRNA7-233	ENST00000638031	SF3B3	Q15393	1217 aa	Known RBP	24.23	■■□□□ 1.47
CHRNA7-233	ENST00000638031	PI4KAP1	Q8N8J0	262 aa		24.23	■■□□□ 1.47
CHRNA7-233	ENST00000638031	MAP3K2	Q9Y2U5	619 aa		24.23	■■□□□ 1.47
CHRNA7-233	ENST00000638031	TAF1	P21675	1872 aa		24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	IRS4	O14654	1257 aa	Predicted RBP	24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	BBOX1	O75936	387 aa		24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	SLC4A2	P04920	1241 aa		24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	IGKV5-2	P06315	115 aa		24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	KSR2	Q6VAB6	950 aa		24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	24.22	■■□□□ 1.47
CHRNA7-233	ENST00000638031	ZNF521	Q96K83	1311 aa		24.21	■■□□□ 1.47
CHRNA7-233	ENST00000638031	GRAP	Q13588	217 aa		24.21	■■□□□ 1.47
CHRNA7-233	ENST00000638031	DDX46	Q7L014	1031 aa	Known RBP	24.21	■■□□□ 1.47

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