RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 LAMB2P55268 1798 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 ANKRD36CQ5JPF3 1778 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 DDNO94850 711 aaPredicted RBP10.27□□□□□ -0.77
PNKP-229ENST00000637897 LMOD3Q0VAK6 560 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 WDR43Q15061 677 aaKnown RBP eCLIP10.27□□□□□ -0.77
PNKP-229ENST00000637897 SLC10A5Q5PT55 438 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 NPM2Q86SE8 214 aaKnown RBP10.27□□□□□ -0.77
PNKP-229ENST00000637897 NLRP10Q86W26 655 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 C8orf58Q8NAV2 365 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 ZNF277Q9NRM2 450 aaPredicted RBP10.27□□□□□ -0.77
PNKP-229ENST00000637897 LAS1LQ9Y4W2 734 aaKnown RBP10.27□□□□□ -0.77
PNKP-229ENST00000637897 ZNF541Q9H0D2 1346 aa10.27□□□□□ -0.77
PNKP-229ENST00000637897 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
PNKP-229ENST00000637897 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
PNKP-229ENST00000637897 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
PNKP-229ENST00000637897 KIF6Q6ZMV9 814 aa10.26□□□□□ -0.77
PNKP-229ENST00000637897 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
PNKP-229ENST00000637897 KDM2BQ8NHM5 1336 aa10.26□□□□□ -0.77
PNKP-229ENST00000637897 LTBP1Q14766 1721 aa10.25□□□□□ -0.77
PNKP-229ENST00000637897 DDX60Q8IY21 1712 aaKnown RBP10.25□□□□□ -0.77
PNKP-229ENST00000637897 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
PNKP-229ENST00000637897 TCIRG1Q13488 830 aa10.25□□□□□ -0.77
PNKP-229ENST00000637897 CCDC93Q567U6 631 aa10.25□□□□□ -0.77
PNKP-229ENST00000637897 ISCA1Q9BUE6 129 aa10.25□□□□□ -0.77
PNKP-229ENST00000637897 PHAXQ9H814 394 aaKnown RBP10.25□□□□□ -0.77
PNKP-229ENST00000637897 PCNTO95613 3336 aa10.25□□□□□ -0.77
PNKP-229ENST00000637897 FZD9O00144 591 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 NPHP1O15259 732 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 SLC34A2O95436 690 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 HOXB7P09629 217 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 HCLS1P14317 486 aaPredicted RBP10.24□□□□□ -0.77
PNKP-229ENST00000637897 CRAMP1Q96RY5 1269 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 NYXQ9GZU5 481 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 IFT57Q9NWB7 429 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 ABCC4O15439 1325 aa10.24□□□□□ -0.77
PNKP-229ENST00000637897 ELL2O00472 640 aaPredicted RBP10.23□□□□□ -0.77
PNKP-229ENST00000637897 VEGFAP15692 232 aaPredicted RBP10.23□□□□□ -0.77
PNKP-229ENST00000637897 FSTL1Q12841 308 aa10.23□□□□□ -0.77
PNKP-229ENST00000637897 PARP10Q53GL7 1025 aa10.23□□□□□ -0.77
PNKP-229ENST00000637897 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
PNKP-229ENST00000637897 L3MBTL3Q96JM7 780 aaPredicted RBP10.23□□□□□ -0.77
PNKP-229ENST00000637897 UTP14AQ9BVJ6 771 aaKnown RBP10.23□□□□□ -0.77
PNKP-229ENST00000637897 ADAMTSL1Q8N6G6 1762 aa10.23□□□□□ -0.77
PNKP-229ENST00000637897 DUOX1Q9NRD9 1551 aa10.22□□□□□ -0.77
PNKP-229ENST00000637897 ATP5J2-PTCD1G3V325 749 aa10.22□□□□□ -0.77
PNKP-229ENST00000637897 TCERG1O14776 1098 aaKnown RBP10.22□□□□□ -0.77
PNKP-229ENST00000637897 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
PNKP-229ENST00000637897 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
PNKP-229ENST00000637897 IARSP41252 1262 aaKnown RBP10.22□□□□□ -0.77
PNKP-229ENST00000637897 APLP1P51693 650 aa10.22□□□□□ -0.77
PNKP-229ENST00000637897 PLBD2Q8NHP8 589 aa10.22□□□□□ -0.77
PNKP-229ENST00000637897 TSR2Q969E8 191 aaKnown RBP10.22□□□□□ -0.77
PNKP-229ENST00000637897 PSMD1Q99460 953 aa10.22□□□□□ -0.77
PNKP-229ENST00000637897 SPINK5Q9NQ38 1064 aaPredicted RBP10.22□□□□□ -0.77
PNKP-229ENST00000637897 CAPN15O75808 1086 aa10.21□□□□□ -0.77
PNKP-229ENST00000637897 SOGA3Q5TF21 947 aa10.21□□□□□ -0.77
PNKP-229ENST00000637897 ANKRD13DQ6ZTN6 518 aa10.21□□□□□ -0.77
PNKP-229ENST00000637897 PPP1R42Q7Z4L9 355 aa10.21□□□□□ -0.77
PNKP-229ENST00000637897 WWC1Q8IX03 1113 aa10.21□□□□□ -0.77
PNKP-229ENST00000637897 RTKN2Q8IZC4 609 aa10.21□□□□□ -0.77
PNKP-229ENST00000637897 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
PNKP-229ENST00000637897 PPEF1O14829 653 aaPredicted RBP10.2□□□□□ -0.78
PNKP-229ENST00000637897 TRIM28Q13263 835 aaKnown RBP10.2□□□□□ -0.78
PNKP-229ENST00000637897 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
PNKP-229ENST00000637897 G2E3Q7L622 706 aa10.2□□□□□ -0.78
PNKP-229ENST00000637897 SMC1BQ8NDV3 1235 aa10.2□□□□□ -0.78
PNKP-229ENST00000637897 JARID2Q92833 1246 aaPredicted RBP10.2□□□□□ -0.78
PNKP-229ENST00000637897 FAM89AQ96GI7 184 aa10.2□□□□□ -0.78
PNKP-229ENST00000637897 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
PNKP-229ENST00000637897 TAF1DQ9H5J8 278 aaPredicted RBP10.2□□□□□ -0.78
PNKP-229ENST00000637897 ATP6V0A2Q9Y487 856 aa10.2□□□□□ -0.78
PNKP-229ENST00000637897 LRRC37AA6NMS7 1700 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 SH3TC1Q8TE82 1336 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 ANP32CO43423 234 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
PNKP-229ENST00000637897 GNAI1P63096 354 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 DPY19L2Q6NUT2 758 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 RPGRQ92834 1020 aaKnown RBP10.19□□□□□ -0.78
PNKP-229ENST00000637897 CELF1Q92879 486 aaKnown RBP10.19□□□□□ -0.78
PNKP-229ENST00000637897 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
PNKP-229ENST00000637897 RTFDC1Q9BY42 306 aaPredicted RBP10.19□□□□□ -0.78
PNKP-229ENST00000637897 HYPKQ9NX55 129 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 TRMT112Q9UI30 125 aaKnown RBP10.19□□□□□ -0.78
PNKP-229ENST00000637897 SCN4AP35499 1836 aa10.19□□□□□ -0.78
PNKP-229ENST00000637897 RNF123Q5XPI4 1314 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 PASKQ96RG2 1323 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 IGKV5-2P06315 115 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 SCNN1DP51172 638 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 SF3B3Q15393 1217 aaKnown RBP10.18□□□□□ -0.78
PNKP-229ENST00000637897 HSP90AB3PQ58FF7 597 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
PNKP-229ENST00000637897 C16orf71Q8IYS4 520 aaPredicted RBP10.18□□□□□ -0.78
PNKP-229ENST00000637897 JMYQ8N9B5 988 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 KLRG1Q96E93 195 aa10.18□□□□□ -0.78
PNKP-229ENST00000637897 YDJCA8MPS7 323 aa10.17□□□□□ -0.78
PNKP-229ENST00000637897 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
PNKP-229ENST00000637897 FMR1Q06787 632 aaKnown RBP eCLIP10.17□□□□□ -0.78
PNKP-229ENST00000637897 GRAPQ13588 217 aa10.17□□□□□ -0.78
PNKP-229ENST00000637897 AOC3Q16853 763 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms