RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 DCCP43146 1447 aa11.67□□□□□ -0.54
CACNA1A-248ENST00000637774 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-248ENST00000637774 BICDL1Q6ZP65 573 aa11.67□□□□□ -0.54
CACNA1A-248ENST00000637774 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
CACNA1A-248ENST00000637774 GOLIM4O00461 696 aa11.66□□□□□ -0.54
CACNA1A-248ENST00000637774 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-248ENST00000637774 CNNM1Q9NRU3 951 aa11.66□□□□□ -0.54
CACNA1A-248ENST00000637774 SGSM2O43147 1006 aa11.66□□□□□ -0.54
CACNA1A-248ENST00000637774 LRRC24Q50LG9 513 aa11.66□□□□□ -0.54
CACNA1A-248ENST00000637774 FAM182BQ5T319 152 aa11.66□□□□□ -0.54
CACNA1A-248ENST00000637774 CHGBP05060 677 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 SLIT3O75094 1523 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 TTC41PQ6P2S7 1318 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 ATP6V1AP38606 617 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 PTH1RQ03431 593 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 STK3Q13188 491 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 WASHC4Q2M389 1173 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 PUS3Q9BZE2 481 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 NUCB2P80303 420 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
CACNA1A-248ENST00000637774 CPDO75976 1380 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 HSP90B1P14625 803 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 FAM98CQ17RN3 349 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 ATG3Q9NT62 314 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 SLFNL1Q499Z3 407 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 HELBQ8NG08 1087 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 CAMTA1Q9Y6Y1 1673 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 PPFIA3O75145 1194 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 FOSBP53539 338 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 MTX1Q13505 466 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 HSP90AB3PQ58FF7 597 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 LDHAL6AQ6ZMR3 332 aa11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-248ENST00000637774 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 HLFQ16534 295 aa11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 GDPD2Q9HCC8 539 aa11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 RBM8AQ9Y5S9 174 aaKnown RBP11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 SALL3Q9BXA9 1300 aa11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 CCDC83Q8IWF9 413 aa11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
CACNA1A-248ENST00000637774 A0A0D9SFI3 127 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 VPS37CA5D8V6 355 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 TOM1O60784 492 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 TTC39AQ5SRH9 613 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 NCOA3Q9Y6Q9 1424 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 HCLS1P14317 486 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 TCIRG1Q13488 830 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 SNX14Q9Y5W7 946 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 CYP46A1Q9Y6A2 500 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 RGPD5Q99666 1765 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 RAB3GAP1Q15042 981 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 MEX3CQ5U5Q3 659 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 SMIM5Q71RC9 77 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 NECAB1Q8N987 351 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
CACNA1A-248ENST00000637774 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 RNF20Q5VTR2 975 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 CAVIN1Q6NZI2 390 aaKnown RBP11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 OVOS2A0A0G2JMS6 1433 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 A0A1B0GUL7 405 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 AK2P54819 239 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 ADCK5Q3MIX3 580 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 CCDC158Q5M9N0 1113 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 COPRSQ9NQ92 184 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 COL5A2P05997 1499 aaPredicted RBP11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 HIP1O00291 1037 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 APPP05067 770 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 MCM2P49736 904 aa11.61□□□□□ -0.55
CACNA1A-248ENST00000637774 AOX1Q06278 1338 aa11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 RAD50Q92878 1312 aa11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 IRS4O14654 1257 aaPredicted RBP11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 HSPA4P34932 840 aa11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 EYA2O00167 538 aa11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 KCNQ2O43526 872 aa11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 BLOC1S2Q6QNY1 142 aa11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 LSG1Q9H089 658 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 CWC22Q9HCG8 908 aaKnown RBP11.6□□□□□ -0.55
CACNA1A-248ENST00000637774 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 CCDC24Q8N4L8 307 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 H7C1W4 665 aa11.59□□□□□ -0.55
CACNA1A-248ENST00000637774 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms