RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 ZNF277Q9NRM2 450 aaPredicted RBP26.22■■□□□ 1.79
CLN6-222ENST00000637667 XAGE3Q8WTP9 111 aa26.21■■□□□ 1.79
CLN6-222ENST00000637667 DDX21Q9NR30 783 aaKnown RBP eCLIP26.21■■□□□ 1.79
CLN6-222ENST00000637667 WDR90Q96KV7 1748 aa26.21■■□□□ 1.79
CLN6-222ENST00000637667 DDNO94850 711 aaPredicted RBP26.2■■□□□ 1.78
CLN6-222ENST00000637667 AIMP1Q12904 312 aaKnown RBP26.2■■□□□ 1.78
CLN6-222ENST00000637667 UTP14AQ9BVJ6 771 aaKnown RBP26.2■■□□□ 1.78
CLN6-222ENST00000637667 HTRA3P83110 453 aa26.19■■□□□ 1.78
CLN6-222ENST00000637667 HOXB7P09629 217 aa26.18■■□□□ 1.78
CLN6-222ENST00000637667 HSP90AB3PQ58FF7 597 aa26.18■■□□□ 1.78
CLN6-222ENST00000637667 CC2D2BQ6DHV5 1058 aa26.18■■□□□ 1.78
CLN6-222ENST00000637667 C3orf67Q6ZVT6 689 aa26.18■■□□□ 1.78
CLN6-222ENST00000637667 SYNE4Q8N205 404 aa26.18■■□□□ 1.78
CLN6-222ENST00000637667 RBM17Q96I25 401 aaKnown RBP26.18■■□□□ 1.78
CLN6-222ENST00000637667 CFAP44Q96MT7 982 aa26.18■■□□□ 1.78
CLN6-222ENST00000637667 HDGFL1Q5TGJ6 251 aa26.17■■□□□ 1.78
CLN6-222ENST00000637667 CRAMP1Q96RY5 1269 aa26.17■■□□□ 1.78
CLN6-222ENST00000637667 CHPF2Q9P2E5 772 aa26.17■■□□□ 1.78
CLN6-222ENST00000637667 SNED1Q8TER0 1413 aa26.16■■□□□ 1.78
CLN6-222ENST00000637667 IARSP41252 1262 aaKnown RBP26.16■■□□□ 1.78
CLN6-222ENST00000637667 SLC10A5Q5PT55 438 aa26.16■■□□□ 1.78
CLN6-222ENST00000637667 NLRP3Q96P20 1036 aa26.16■■□□□ 1.78
CLN6-222ENST00000637667 PSMD1Q99460 953 aa26.16■■□□□ 1.78
CLN6-222ENST00000637667 APAF1O14727 1248 aa26.15■■□□□ 1.78
CLN6-222ENST00000637667 TCIRG1Q13488 830 aa26.15■■□□□ 1.78
CLN6-222ENST00000637667 NLRP10Q86W26 655 aa26.15■■□□□ 1.78
CLN6-222ENST00000637667 RNF123Q5XPI4 1314 aa26.14■■□□□ 1.78
CLN6-222ENST00000637667 L3MBTL3Q96JM7 780 aaPredicted RBP26.14■■□□□ 1.78
CLN6-222ENST00000637667 MBIPQ9NS73 344 aa26.14■■□□□ 1.78
CLN6-222ENST00000637667 ZNF541Q9H0D2 1346 aa26.14■■□□□ 1.77
CLN6-222ENST00000637667 DUSP27Q5VZP5 1158 aa26.13■■□□□ 1.77
CLN6-222ENST00000637667 KLRG1Q96E93 195 aa26.13■■□□□ 1.77
CLN6-222ENST00000637667 IQCA1LA6NCM1 817 aa26.12■■□□□ 1.77
CLN6-222ENST00000637667 PPEF1O14829 653 aaPredicted RBP26.12■■□□□ 1.77
CLN6-222ENST00000637667 ZNF853P0CG23 659 aa26.12■■□□□ 1.77
CLN6-222ENST00000637667 GRIPAP1Q4V328 841 aa26.12■■□□□ 1.77
CLN6-222ENST00000637667 DBF4Q9UBU7 674 aaPredicted RBP26.12■■□□□ 1.77
CLN6-222ENST00000637667 FZD9O00144 591 aa26.1■■□□□ 1.77
CLN6-222ENST00000637667 TCERG1O14776 1098 aaKnown RBP26.1■■□□□ 1.77
CLN6-222ENST00000637667 CALD1Q05682 793 aaKnown RBP26.1■■□□□ 1.77
CLN6-222ENST00000637667 PLBD2Q8NHP8 589 aa26.1■■□□□ 1.77
CLN6-222ENST00000637667 IFT57Q9NWB7 429 aa26.1■■□□□ 1.77
CLN6-222ENST00000637667 TRMT112Q9UI30 125 aaKnown RBP26.1■■□□□ 1.77
CLN6-222ENST00000637667 HCLS1P14317 486 aaPredicted RBP26.09■■□□□ 1.77
CLN6-222ENST00000637667 CHADLQ6NUI6 762 aa26.09■■□□□ 1.77
CLN6-222ENST00000637667 SLC51AQ86UW1 340 aa26.09■■□□□ 1.77
CLN6-222ENST00000637667 JDP2Q8WYK2 163 aa26.09■■□□□ 1.77
CLN6-222ENST00000637667 TAF1DQ9H5J8 278 aaPredicted RBP26.09■■□□□ 1.77
CLN6-222ENST00000637667 SH3TC1Q8TE82 1336 aa26.09■■□□□ 1.77
CLN6-222ENST00000637667 POTEIP0CG38 1075 aa26.08■■□□□ 1.77
CLN6-222ENST00000637667 POTEJP0CG39 1038 aa26.08■■□□□ 1.77
CLN6-222ENST00000637667 GNAI1P63096 354 aa26.08■■□□□ 1.77
CLN6-222ENST00000637667 ANKRD13DQ6ZTN6 518 aa26.08■■□□□ 1.77
CLN6-222ENST00000637667 HYPKQ9NX55 129 aa26.08■■□□□ 1.77
CLN6-222ENST00000637667 ABCC4O15439 1325 aa26.07■■□□□ 1.76
CLN6-222ENST00000637667 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
CLN6-222ENST00000637667 TMX4Q9H1E5 349 aaPredicted RBP26.06■■□□□ 1.76
CLN6-222ENST00000637667 ATP6V0A2Q9Y487 856 aa26.06■■□□□ 1.76
CLN6-222ENST00000637667 ANKRD36CQ5JPF3 1778 aa26.05■■□□□ 1.76
CLN6-222ENST00000637667 LDHDQ86WU2 507 aa26.05■■□□□ 1.76
CLN6-222ENST00000637667 LARGE2Q8N3Y3 721 aa26.05■■□□□ 1.76
CLN6-222ENST00000637667 JMYQ8N9B5 988 aa26.05■■□□□ 1.76
CLN6-222ENST00000637667 ISCA1Q9BUE6 129 aa26.05■■□□□ 1.76
CLN6-222ENST00000637667 HACL1Q9UJ83 578 aa26.05■■□□□ 1.76
CLN6-222ENST00000637667 BBOX1O75936 387 aa26.04■■□□□ 1.76
CLN6-222ENST00000637667 CCDC184Q52MB2 194 aa26.04■■□□□ 1.76
CLN6-222ENST00000637667 GPC2Q8N158 579 aa26.04■■□□□ 1.76
CLN6-222ENST00000637667 EIF6P56537 245 aaKnown RBP26.03■■□□□ 1.76
CLN6-222ENST00000637667 DDX46Q7L014 1031 aaKnown RBP26.03■■□□□ 1.76
CLN6-222ENST00000637667 ZNF428Q96B54 188 aa26.03■■□□□ 1.76
CLN6-222ENST00000637667 COL4A5P29400 1685 aa26.03■■□□□ 1.76
CLN6-222ENST00000637667 SCN4AP35499 1836 aa26.02■■□□□ 1.76
CLN6-222ENST00000637667 ATP5J2-PTCD1G3V325 749 aa26.02■■□□□ 1.76
CLN6-222ENST00000637667 ELL2O00472 640 aaPredicted RBP26.02■■□□□ 1.76
CLN6-222ENST00000637667 EPHX2P34913 555 aa26.01■■□□□ 1.75
CLN6-222ENST00000637667 EAPPQ56P03 285 aaPredicted RBP26.01■■□□□ 1.75
CLN6-222ENST00000637667 PPIP5K2O43314 1243 aa26■■□□□ 1.75
CLN6-222ENST00000637667 GRAPQ13588 217 aa26■■□□□ 1.75
CLN6-222ENST00000637667 SP8Q8IXZ3 490 aa26■■□□□ 1.75
CLN6-222ENST00000637667 NIM1KQ8IY84 436 aa26■■□□□ 1.75
CLN6-222ENST00000637667 GRAPLQ8TC17 118 aaPredicted RBP26■■□□□ 1.75
CLN6-222ENST00000637667 GJA3Q9Y6H8 435 aa26■■□□□ 1.75
CLN6-222ENST00000637667 GOLGA2Q08379 1002 aa25.99■■□□□ 1.75
CLN6-222ENST00000637667 TRIM28Q13263 835 aaKnown RBP25.99■■□□□ 1.75
CLN6-222ENST00000637667 C8orf58Q8NAV2 365 aa25.99■■□□□ 1.75
CLN6-222ENST00000637667 FAM89AQ96GI7 184 aa25.99■■□□□ 1.75
CLN6-222ENST00000637667 RTFDC1Q9BY42 306 aaPredicted RBP25.99■■□□□ 1.75
CLN6-222ENST00000637667 RIC3Q7Z5B4 369 aa25.98■■□□□ 1.75
CLN6-222ENST00000637667 PNMA8AQ86V59 439 aaPredicted RBP25.98■■□□□ 1.75
CLN6-222ENST00000637667 SUPT20HQ8NEM7 779 aa25.98■■□□□ 1.75
CLN6-222ENST00000637667 VPS33BQ9H267 617 aa25.98■■□□□ 1.75
CLN6-222ENST00000637667 AOC3Q16853 763 aa25.97■■□□□ 1.75
CLN6-222ENST00000637667 DPP8Q6V1X1 898 aaPredicted RBP25.97■■□□□ 1.75
CLN6-222ENST00000637667 MPNDQ8N594 471 aa25.97■■□□□ 1.75
CLN6-222ENST00000637667 PHAXQ9H814 394 aaKnown RBP25.97■■□□□ 1.75
CLN6-222ENST00000637667 CREBZFQ9NS37 354 aa25.97■■□□□ 1.75
CLN6-222ENST00000637667 CLEC11AQ9Y240 323 aa25.97■■□□□ 1.75
CLN6-222ENST00000637667 PASKQ96RG2 1323 aa25.96■■□□□ 1.75
CLN6-222ENST00000637667 LAMB2P55268 1798 aa25.96■■□□□ 1.75
CLN6-222ENST00000637667 SF3B3Q15393 1217 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms