RNA–Protein interactions for RNA: ENST00000637352.1

SMARCA2-260, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-260ENST00000637352 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
SMARCA2-260ENST00000637352 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-260ENST00000637352 COL4A5P29400 1685 aa11.02□□□□□ -0.64
SMARCA2-260ENST00000637352 COL3A1P02461 1466 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-260ENST00000637352 SCNN1DP51172 638 aa11.02□□□□□ -0.65
SMARCA2-260ENST00000637352 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
SMARCA2-260ENST00000637352 CST9Q5W186 159 aa11.02□□□□□ -0.65
SMARCA2-260ENST00000637352 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
SMARCA2-260ENST00000637352 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
SMARCA2-260ENST00000637352 BCORQ6W2J9 1755 aa11.01□□□□□ -0.65
SMARCA2-260ENST00000637352 ADAMTSL1Q8N6G6 1762 aa11.01□□□□□ -0.65
SMARCA2-260ENST00000637352 RPGRQ92834 1020 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-260ENST00000637352 PSMD1Q99460 953 aa11.01□□□□□ -0.65
SMARCA2-260ENST00000637352 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-260ENST00000637352 LTBP1Q14766 1721 aa11.01□□□□□ -0.65
SMARCA2-260ENST00000637352 ARFGEF2Q9Y6D5 1785 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 U2AF1L5P0DN76 240 aaPredicted RBP11□□□□□ -0.65
SMARCA2-260ENST00000637352 MYL6BP14649 208 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 ECE1P42892 770 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 U2AF1Q01081 240 aaKnown RBP eCLIP11□□□□□ -0.65
SMARCA2-260ENST00000637352 AOC3Q16853 763 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 TTLL7Q6ZT98 887 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 C3orf67Q6ZVT6 689 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
SMARCA2-260ENST00000637352 ZBTB3Q9H5J0 574 aa11□□□□□ -0.65
SMARCA2-260ENST00000637352 SIPA1L3O60292 1781 aaPredicted RBP11□□□□□ -0.65
SMARCA2-260ENST00000637352 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 PPIP5K2O43314 1243 aa10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 SUSD4Q5VX71 490 aa10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 NIM1KQ8IY84 436 aa10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 GLIS2Q9BZE0 524 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 MCOLN1Q9GZU1 580 aa10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 CLSPNQ9HAW4 1339 aa10.99□□□□□ -0.65
SMARCA2-260ENST00000637352 CRY2Q49AN0 593 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 DLK2Q6UY11 383 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 USP50Q70EL3 339 aaPredicted RBP10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 RBM17Q96I25 401 aaKnown RBP10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 CFAP53Q96M91 514 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 NYXQ9GZU5 481 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 SNED1Q8TER0 1413 aa10.98□□□□□ -0.65
SMARCA2-260ENST00000637352 SHTN1A0MZ66 631 aa10.97□□□□□ -0.65
SMARCA2-260ENST00000637352 KIF6Q6ZMV9 814 aa10.97□□□□□ -0.65
SMARCA2-260ENST00000637352 ZIC5Q96T25 663 aa10.97□□□□□ -0.65
SMARCA2-260ENST00000637352 NUDCQ9Y266 331 aa10.97□□□□□ -0.65
SMARCA2-260ENST00000637352 MAP3K15Q6ZN16 1313 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 RAD17O75943 681 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 GMPSP49915 693 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 CXCL9Q07325 125 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 DGKZQ13574 1117 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 TAF7Q15545 349 aaPredicted RBP10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 CC2D2BQ6DHV5 1058 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 CIAPIN1Q6FI81 312 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 SAPCD2Q86UD0 394 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 THUMPD2Q9BTF0 503 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 ADARB2Q9NS39 739 aaKnown RBP10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 GPRC5DQ9NZD1 345 aa10.96□□□□□ -0.65
SMARCA2-260ENST00000637352 NPC1L1Q9UHC9 1359 aa10.95□□□□□ -0.66
SMARCA2-260ENST00000637352 HOXA10P31260 410 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-260ENST00000637352 RGS19P49795 217 aa10.95□□□□□ -0.66
SMARCA2-260ENST00000637352 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
SMARCA2-260ENST00000637352 BCL2L13Q9BXK5 485 aa10.95□□□□□ -0.66
SMARCA2-260ENST00000637352 ERVV-1B6SEH8 477 aa10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 NTSR2O95665 410 aa10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 ANXA1P04083 346 aa10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 MAP2K2P36507 400 aa10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 HIRAP54198 1017 aaPredicted RBP10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 USP48Q86UV5 1035 aa10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 CRAMP1Q96RY5 1269 aa10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 TMX4Q9H1E5 349 aaPredicted RBP10.94□□□□□ -0.66
SMARCA2-260ENST00000637352 ZNF34Q8IZ26 560 aa10.93□□□□□ -0.66
SMARCA2-260ENST00000637352 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
SMARCA2-260ENST00000637352 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
SMARCA2-260ENST00000637352 ABCC4O15439 1325 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 RGL2O15211 777 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 HCLS1P14317 486 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 EIF2S2P20042 333 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 SOX10P56693 466 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 EIF4A1P60842 406 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 DPP8Q6V1X1 898 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 NECTIN2Q92692 538 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 ATP6V0A2Q9Y487 856 aa10.92□□□□□ -0.66
SMARCA2-260ENST00000637352 CASP8AP2Q9UKL3 1982 aa10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 HTATSF1O43719 755 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 HUNKP57058 714 aa10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 AIMP1Q12904 312 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 GIGYF2Q6Y7W6 1299 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 SAMD7Q7Z3H4 446 aa10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 MPNDQ8N594 471 aa10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 UTP14AQ9BVJ6 771 aaKnown RBP10.91□□□□□ -0.66
SMARCA2-260ENST00000637352 CNOT7Q9UIV1 285 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms